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13_1_40cm_3_scaffold_2436

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2436_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10..771)
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTN5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90576.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
13_1_40cm_3_scaffold_2436_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(771..1460)
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTN5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90576.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
13_1_40cm_3_scaffold_2436_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1460..2368)
-----------------
DNA (909bp)
protein (303aa)
ABC transporter related n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020E4_SOLUE
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ84721.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_3_scaffold_2436_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2368..2763)
-----------------
DNA (396bp)
protein (132aa)
Transcriptional regulator, GntR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020E3_SOLUE
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABJ84722.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_1_40cm_3_scaffold_2436_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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2841..3857
-----------------
DNA (1017bp)
protein (339aa)
Helix-turn-helix, type 11 domain protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Helix-turn-helix, type 11 domain protein id=12555814 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Helix-turn-helix, type 11 domain protein
13_1_40cm_3_scaffold_2436_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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4011..5633
-----------------
DNA (1623bp)
protein (541aa)
Amidohydrolase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QNK8_SPILD
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
amidohydrolase
13_1_40cm_3_scaffold_2436_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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5857..8001
-----------------
DNA (2145bp)
protein (715aa)
TonB-dependent receptor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NY6_SOLUE
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
TonB-dependent receptor
13_1_40cm_3_scaffold_2436_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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8054..8923
-----------------
DNA (870bp)
protein (290aa)
Cof protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB4_KORVE
Cof protein; K07024 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Cof protein
13_1_40cm_3_scaffold_2436_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9327..9836
-----------------
DNA (510bp)
protein (170aa)
DinB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV3_KORVE
DinB family protein
DinB {ECO:0000313|EMBL:ABF43547.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
13_1_40cm_3_scaffold_2436_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9934..12408)
-----------------
DNA (2475bp)
protein (825aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZZ7_SOLUE rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_2436_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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12594..14423
-----------------
DNA (1830bp)
protein (610aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=12557804 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter transmembrane region
Displaying 11 items

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