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13_1_40cm_3_scaffold_2667

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2667_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(3..1085)
DNA (1083bp) protein (361aa)
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.3.-); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_
signal transduction histidine kinase, nitrogen specific, NtrB id=12555763 bin=CNBR_ACIDO species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gnfL; nitrogen fixation master sensor histidine kinase, PAS domain-containing
13_1_40cm_3_scaffold_2667_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1255..3294)
DNA (2040bp) protein (680aa)
ABC transporter ATPase; K06158 ATP-binding cassette, subfamily F, member 3 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ABC transporter ATPase; K06158 ATP-binding cassette, subfamily F, member 3 id=12555764 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_2667_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(3363..3956)
DNA (594bp) protein (198aa)
response regulator receiver protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
response regulator receiver protein id=12555765 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chemotaxis protein CheY
13_1_40cm_3_scaffold_2667_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3960..6092)
DNA (2133bp) protein (711aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXN7_ROSS1
13_1_40cm_3_scaffold_2667_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6310..6900
DNA (591bp) protein (197aa)
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12555766 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma-70 family RNA polymerase sigma factor
13_1_40cm_3_scaffold_2667_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6906..7700
DNA (795bp) protein (265aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_3_scaffold_2667_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7743..8543
DNA (801bp) protein (267aa)
id=12555768 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_3_scaffold_2667_8
unknown

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8596..8691
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 8 items

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