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13_1_40cm_3_scaffold_27021

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_27021_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2..1153)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
diguanylate cyclase and serine/threonine protein kinase with TPR repeats Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_27021_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1172..2095)
DNA (924bp) protein (308aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_27021_3
unknown

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2267..2530
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_27021_trna_1
unknown

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2521..2593
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_27021_4
unknown

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comp(2595..3164)
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_3_scaffold_27021_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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3494..4402
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V0_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54131.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
13_1_40cm_3_scaffold_27021_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4403..5647)
DNA (1245bp) protein (415aa)
histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Histidine kinase id=4058803 bin=GWC2_Methylomirabilis_70_24 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sensor histidine kinase/response regulator
13_1_40cm_3_scaffold_27021_trna_2
unknown

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5742..5823
DNA (82bp)
transferRNA
13_1_40cm_3_scaffold_27021_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5826..6416)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCK3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42130.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_3_scaffold_27021_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6481..6747)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EFL8_GEOS4
Protein of unknown function DUF2277
Uncharacterized protein {ECO:0000313|EMBL:AHG92775.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_27021_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6900..7211
DNA (312bp) protein (104aa)
ycii-like protein id=14633042 bin=bin9_gal15 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
DGPFAETKE family protein
DGPFAETKE family protein {ECO:0000313|EMBL:ABS27031.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_3_scaffold_27021_10
unknown

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7281..7646
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NFH7_9GAMM
hypothetical protein
DGPFAETKE family protein {ECO:0000313|EMBL:CPR22040.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
13_1_40cm_3_scaffold_27021_11
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7758..8825
DNA (1068bp) protein (356aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PG64_9DELT
ECF subfamily RNA polymerase sigma factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPX63370.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cys
13_1_40cm_3_scaffold_27021_12
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

8822..9235
DNA (414bp) protein (138aa)
DoxX family protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULK1_ANASK
DoxX family protein
DoxX; K15977 putative oxidoreductase Tax=RBG_13_Acidobacteria_68_16_curated
13_1_40cm_3_scaffold_27021_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9326..10147
DNA (822bp) protein (274aa)
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG91656.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MatE family protein id=12554642 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Displaying 15 items

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