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13_1_40cm_3_scaffold_3233

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3233_1
unknown

Not on your lists

comp(3..215)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

13_1_40cm_3_scaffold_3233_trna_1
unknown

Not on your lists

comp(345..430)
-----------------
DNA (86bp)
transferRNA
13_1_40cm_3_scaffold_3233_2
unknown

Not on your lists

459..680
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

13_1_40cm_3_scaffold_3233_3
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1225..1479
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EVR0_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKV01210.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein
13_1_40cm_3_scaffold_3233_4
unknown

Not on your lists

1825..2346
-----------------
DNA (522bp)
protein (174aa)

This feature has no annotations

13_1_40cm_3_scaffold_3233_5
unknown

Not on your lists

2383..2571
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

13_1_40cm_3_scaffold_3233_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2630..2986)
-----------------
DNA (357bp)
protein (119aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_3_scaffold_3233_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2983..5322)
-----------------
DNA (2340bp)
protein (780aa)
Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0Z5X4_9CHLO
hypothetical protein; K06888 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_3_scaffold_3233_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5542..6087
-----------------
DNA (546bp)
protein (182aa)
peptidase C56, PfpI; K05520 protease I [EC:3.2.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PfpI familyintracellular protease n=1 Tax=Verrucosispora maris AB-18-032 RepID=F4F7I2_VERMA id=1242392 bin=RBG2 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG2 organism_group=Chloroflexi
Pfpi family intracellular protease
13_1_40cm_3_scaffold_3233_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6166..6990)
-----------------
DNA (825bp)
protein (275aa)
Peptidase M48 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY9_GEMAT
peptidase M48 family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
peptidase M48 family protein
13_1_40cm_3_scaffold_3233_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6987..7901)
-----------------
DNA (915bp)
protein (305aa)
putative ribonuclease BN; K07058 membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ribonuclease BN; K07058 membrane protein id=12554222 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ribonuclease BN
13_1_40cm_3_scaffold_3233_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8073..8522)
-----------------
DNA (450bp)
protein (150aa)
hypothetical protein id=12555995 bin=CNBR_ACIDO species=Atopobium rimae genus=Atopobium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_3_scaffold_3233_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8577..8966)
-----------------
DNA (390bp)
protein (130aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_3_scaffold_3233_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8974..9246)
-----------------
DNA (273bp)
protein (91aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_3_scaffold_3233_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9423..9908)
-----------------
DNA (486bp)
protein (162aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium CSLD10 RepID=G4WVV9_9BACT
Mammalian cell entry related domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_3_scaffold_3233_15
unknown

Not on your lists

10100..10627
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

13_1_40cm_3_scaffold_3233_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10753..11586)
-----------------
DNA (834bp)
protein (278aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium CSLG7 RepID=G4WV37_9BACT
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ABC transporter
13_1_40cm_3_scaffold_3233_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11583..12374)
-----------------
DNA (792bp)
protein (264aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium CSLG7 RepID=G4WV36_9BACT
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_3233_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12586..13962)
-----------------
DNA (1377bp)
protein (459aa)
Fis family two component sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=4828261 bin=GWC2_Methylomirabilis_70_16 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family two component sigma-54 specific transcriptional regulator
13_1_40cm_3_scaffold_3233_19
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(14165..14785)
-----------------
DNA (621bp)
protein (207aa)
pcm; protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase id=3721382 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
13_1_40cm_3_scaffold_3233_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14986..16593
-----------------
DNA (1608bp)
protein (536aa)
accB; acetyl-CoA carboxylase carboxyltransferase; K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVB5_RUBXD
13_1_40cm_3_scaffold_3233_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16703..17542
-----------------
DNA (840bp)
protein (280aa)
enoyl-CoA hydratase/isomerase; K13766 methylglutaconyl-CoA hydratase [EC:4.2.1.18] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative Enoyl-CoA hydratase, membrane protein n=1 Tax=mine drainage metagenome PF93_9ZZZZ">RepID=E6PF93_9ZZZZ
enoyl-CoA hydratase/isomerase
13_1_40cm_3_scaffold_3233_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17593..19182
-----------------
DNA (1590bp)
protein (530aa)
carbamoyl-phosphate synthase L chain ATP-binding; K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acetyl/propionyl-CoA carboxylase subunit alpha (EC:6.3.4.14)
biotin carboxylase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DCF3
Displaying 23 items

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