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13_1_40cm_3_scaffold_3708

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3708_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1..2358
DNA (2358bp) protein (786aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
TonB-dependent receptor id=12556886 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor
13_1_40cm_3_scaffold_3708_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

2488..3429
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0770_11C06 RepID=E7C6X9_9BACT rbh
cyclase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cyclase
13_1_40cm_3_scaffold_3708_3
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3481..3921)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00037D6A5F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_40cm_3_scaffold_3708_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4045..5937)
DNA (1893bp) protein (631aa)
TPR repeat-containing protein n=1 Tax=Rhodopirellula baltica WH47 RepID=F2ANY5_RHOBT rbh
signal peptide Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
c-type cytochrome precursor
13_1_40cm_3_scaffold_3708_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6008..7351
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020C4_SOLUE
thiol-disulfide isomerase or thioredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
thiol-disulfide isomerase or thioredoxin
13_1_40cm_3_scaffold_3708_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7420..8265
DNA (846bp) protein (282aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_3708_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8302..10101)
DNA (1800bp) protein (600aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Type II secretion system protein E (GspE) id=3960247 bin=GWA2_Methylomirabilis_73_35 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type II secretion system protein E (GspE)
13_1_40cm_3_scaffold_3708_8
unknown

Not on your lists

comp(10416..10826)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_3_scaffold_3708_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10935..11192
DNA (258bp) protein (86aa)
ThiJ/PfpI domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFM3_ANADF
ThiJ/PfpI domain-containing protein
ThiJ/PfpI domain protein {ECO:0000313|EMBL:ABS27519.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_3_scaffold_3708_10
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11234..12178
DNA (945bp) protein (315aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ABU59851.1}; EC=2.7.6.1 {ECO:0000313|EMBL:ABU59851.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae;
Ribose-phosphate pyrophosphokinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQK5_ROSCS
13_1_40cm_3_scaffold_3708_11
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12339..13820)
DNA (1482bp) protein (494aa)
Cytochrome c assembly protein id=4238829 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
cytochrome c assembly protein Tax=GWA2_Elusimicrobia_69_24_curated
putative cytochrome c biogenesis protein
13_1_40cm_3_scaffold_3708_12
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14097..14828)
DNA (732bp) protein (244aa)
UPI0003CE06A3 related cluster n=1 Tax=unknown RepID=UPI0003CE06A3
Aldo/keto reductase {ECO:0000313|EMBL:ESW87544.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJ
hypothetical protein
Displaying 12 items

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