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13_1_40cm_3_scaffold_4142

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4142_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(142..360)
DNA (219bp) protein (73aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_3_scaffold_4142_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(408..1124)
DNA (717bp) protein (239aa)
PyrF; orotidine-5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=12556766 bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
13_1_40cm_3_scaffold_4142_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1381..2037)
DNA (657bp) protein (219aa)
pyrD; dihydroorotate dehydrogenase (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) (EC:1.3.98.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pyrD; dihydroorotate dehydrogenase (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) (EC:1.3.98.1) id=12556765 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dihydroorotate dehydrogenase (EC:1.3.98.1)
13_1_40cm_3_scaffold_4142_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2522..2851)
DNA (330bp) protein (110aa)
dihydroorotate oxidase B, electron transfer subunit (EC:1.3.3.1); K02823 dihydroorotate dehydrogenase electron transfer subunit id=12556764 bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
2-polyprenylphenol 6-hydroxylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
13_1_40cm_3_scaffold_4142_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2811..3296)
DNA (486bp) protein (162aa)
dihydroorotate oxidase B, electron transfer subunit (EC:1.3.3.1); K02823 dihydroorotate dehydrogenase electron transfer subunit id=12556764 bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
2-polyprenylphenol 6-hydroxylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
13_1_40cm_3_scaffold_4142_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3333..5072
DNA (1740bp) protein (580aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=12556763 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_4142_7
unknown

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comp(5179..5421)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_4142_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5570..5788
DNA (219bp) protein (73aa)
pyrR; Pyrimidine operon regulatory protein; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=2 Tax=Clostridium RepID=PYRR_CLOB8
13_1_40cm_3_scaffold_4142_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5924..6493)
DNA (570bp) protein (190aa)
cell surface glycoprotein (s-layer protein) related protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_3_scaffold_4142_10
unknown

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6710..6928
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_3_scaffold_4142_11

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7627..9546
DNA (1920bp) protein (640aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00426.1}; TaxID=1457863 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_133_A04.;"
Displaying 11 items

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