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13_1_40cm_3_scaffold_5008

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5008_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

3..1322
DNA (1320bp) protein (440aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein; K09800 hypothetical protein id=12555780 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_5008_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

1322..4288
DNA (2967bp) protein (989aa)
surface antigen Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
surface antigen id=12555781 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
outer membrane protein/protective antigen OMA87
13_1_40cm_3_scaffold_5008_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4291..4836
DNA (546bp) protein (182aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_3_scaffold_5008_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4845..5612)
DNA (768bp) protein (256aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12555789 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CAAX amino terminal protease
13_1_40cm_3_scaffold_5008_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5641..6339)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003810E9A
putative periplasmic or secreted lipoprotein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_3_scaffold_5008_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6497..7918
DNA (1422bp) protein (474aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
response regulator in two-component regulatory system, sigma 54-dependent id=12556020 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
13_1_40cm_3_scaffold_5008_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8036..9925
DNA (1890bp) protein (630aa)
Multi-sensor signal transduction histidine kinase (EC:2.7.3.-) id=12556021 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
histidine kinase
13_1_40cm_3_scaffold_5008_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9932..10528
DNA (597bp) protein (199aa)
Protein TolA n=1 Tax=Thauera sp. 28 RepID=N6YHM7_9RHOO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
tonB; protein TonB
13_1_40cm_3_scaffold_5008_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11035..12417
DNA (1383bp) protein (461aa)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=12555790 bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonucleoside-diphosphate reductase class II (EC:1.17.4.1)
Displaying 9 items

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