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13_1_40cm_3_scaffold_511

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_511_1
unknown

Not on your lists

1..123
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_3_scaffold_511_trna_1
unknown

Not on your lists

comp(143..214)
DNA (72bp)
transferRNA
13_1_40cm_3_scaffold_511_2
bacterium YEK0313, Bacteria

Not on your lists

311..874
DNA (564bp) protein (188aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
alkylhydroperoxidase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DACEC8 rbh
peroxidase-related enzyme
13_1_40cm_3_scaffold_511_3
unknown

Not on your lists

comp(917..1957)
DNA (1041bp) protein (347aa)

This feature has no annotations

13_1_40cm_3_scaffold_511_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2062..4527)
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000366AEC6 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_3_scaffold_511_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4590..5045)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AKT1_MARMM
Uncharacterized protein {ECO:0000313|EMBL:AKF86340.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_40cm_3_scaffold_511_6
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(5180..5629)
DNA (450bp) protein (150aa)
DoxX family protein id=2885630 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
DoxX family protein Tax=GWA1_Bdellovibrionales_52_35_curated
DoxX protein
13_1_40cm_3_scaffold_511_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6195..6635)
DNA (441bp) protein (147aa)
OsmC family protein; K04063 osmotically inducible protein OsmC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
OsmC-like protein; K04063 osmotically inducible protein OsmC id=12556309 bin=CNBR_ACIDO species=Saccharomonospora saliphila genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
OsmC-like protein
13_1_40cm_3_scaffold_511_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6868..7470)
DNA (603bp) protein (201aa)
id=12556308 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
id=12556308 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_511_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7487..8080)
DNA (594bp) protein (198aa)
DNA replication and repair protein RecR; K06187 recombination protein RecR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
recR; recombination protein RecR; K06187 recombination protein RecR id=12556305 bin=CNBR_ACIDO species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA replication and repair protein RecR
13_1_40cm_3_scaffold_511_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8129..8401)
DNA (273bp) protein (91aa)
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein; K09747 hypothetical protein id=12556304 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_511_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8416..10122)
DNA (1707bp) protein (569aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=12556303 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
13_1_40cm_3_scaffold_511_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10437..11267)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD30_SINAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_3_scaffold_511_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11437..12039)
DNA (603bp) protein (201aa)
sodA; superoxide dismutase [Mn] (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase id=12557429 bin=CNBR_ACIDO species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_511_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12419..13579)
DNA (1161bp) protein (387aa)
quinolinate synthetase complex subunit alpha (EC:2.5.1.72); K03517 quinolinate synthase [EC:2.5.1.72] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
quinolinate synthetase complex subunit alpha (EC:2.5.1.72)
Quinolinate synthase A n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X127_ACISM
13_1_40cm_3_scaffold_511_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13776..14876)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
radical SAM protein id=12557426 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
hypothetical protein
13_1_40cm_3_scaffold_511_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14953..15459)
DNA (507bp) protein (169aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12557425 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_511_17
unknown

Not on your lists

15846..16208
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_3_scaffold_511_18
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16205..18004
DNA (1800bp) protein (600aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
TonB-dependent outer membrane receptor for cobalamin and Fe transport
Displaying 19 items

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