ggKbase home page

13_1_40cm_3_scaffold_5283

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5283_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2..337)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP3_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TonB-dependent receptor plug domain-containing protein
13_1_40cm_3_scaffold_5283_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(569..1678)
DNA (1110bp) protein (370aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=Q84CV0_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_5283_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1843..3021)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YRN1_BURA4 rbh
13_1_40cm_3_scaffold_5283_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3045..4916
DNA (1872bp) protein (624aa)
putative hybrid histidine kinase (EC:2.7.13.3)
Putative Hybrid histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBG3_9BACT rbh
PAS domain S-box Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_5283_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4913..6139
DNA (1227bp) protein (409aa)
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ICE3_BORPD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
13_1_40cm_3_scaffold_5283_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6666..7019
DNA (354bp) protein (118aa)
short chain dehydrogenase family protein 2 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Short-chain dehydrogenase/reductase SDR id=3352303 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobiaceae bacterium SG-6C genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase
13_1_40cm_3_scaffold_5283_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7134..8192)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E3C317
cyclase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative cyclase
13_1_40cm_3_scaffold_5283_8
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

8235..8459
DNA (225bp) protein (75aa)
MbtH domain protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP51_9BACT
MbtH domain protein {ECO:0000313|EMBL:EHO42166.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
balhimycin biosynthetic protein MbtH
13_1_40cm_3_scaffold_5283_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8456..9253
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037BB768
aldolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
aldolase
13_1_40cm_3_scaffold_5283_10
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9250..10173
DNA (924bp) protein (308aa)
putative quinone oxidoreductase (Cryz), zinc-binding (EC:1.-.-.-)
Uncharacterized protein n=3 Tax=Ralstonia solanacearum RepID=B5SM11_RALSL
NADPH:quinone reductase, zeta-crystallin-like oxidoreductase protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
13_1_40cm_3_scaffold_5283_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10184..10435)
DNA (252bp) protein (84aa)
DNA polymerase subunit beta Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_40cm_3_scaffold_5283_12
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(10491..10811)
DNA (321bp) protein (107aa)
Putative HEPN domain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2T5_THERP
putative HEPN domain
Putative HEPN domain {ECO:0000313|EMBL:ACM05585.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 2
Displaying 12 items

View Taxonomy