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13_1_40cm_3_scaffold_545

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_545_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..1567)
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U78_SOLUE
permease
Permease {ECO:0000313|EMBL:AHG92769.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_545_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1569..1904)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000376EC0A
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ACO32580.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsu
13_1_40cm_3_scaffold_545_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(1981..2700)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ES37_SORC5
hypothetical protein; K07147 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_3_scaffold_545_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2826..3404)
DNA (579bp) protein (193aa)
heat shock gene repressor HrcA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
GrpE protein HSP-70 cofactor id=12554430 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GrpE protein HSP-70 cofactor
13_1_40cm_3_scaffold_545_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3509..6007)
DNA (2499bp) protein (833aa)
Putative metal-dependent phosphohydrolase n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NME4_9BACT
diguanylate cyclase (GGDEF) domain Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative metal-dependent phosphohydrolase
13_1_40cm_3_scaffold_545_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(6027..6635)
DNA (609bp) protein (203aa)
GCN5-related N-acetyltransferase n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EE02_GEOS4
acetyltransferase, ribosomal protein N-acetylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Acetyltransferase
13_1_40cm_3_scaffold_545_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7443..8507
DNA (1065bp) protein (355aa)
General secretion pathway protein A n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEK4_METPP
peptidoglycan-binding domain-containing protein; K02450 general secretion pathway protein A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
gspA; general secretion pathway protein A
13_1_40cm_3_scaffold_545_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8568..10937
DNA (2370bp) protein (790aa)
Gll1201 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_545_9
unknown

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comp(10942..11190)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_3_scaffold_545_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11249..12394)
DNA (1146bp) protein (382aa)
Secretion protein HlyD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IDT3_ANADE
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
secretion protein HlyD
13_1_40cm_3_scaffold_545_trna_1
unknown

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comp(12519..12590)
DNA (72bp)
transferRNA
13_1_40cm_3_scaffold_545_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(12668..13594)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWU6_9GAMM
diguanylate cyclase/phosphodiesterase with FHA and GAF sensor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
diguanylate cyclase
13_1_40cm_3_scaffold_545_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13842..14048)
DNA (207bp) protein (69aa)
CsbD family protein n=1 Tax=Variovorax paradoxus RepID=UPI000362F03C
CsbD family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_3_scaffold_545_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14103..15749)
DNA (1647bp) protein (549aa)
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRH4_SINAD
signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PAS domain-containing protein
Displaying 14 items

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