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13_1_40cm_3_scaffold_4830

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4830_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2..829)
DNA (828bp) protein (276aa)
competence/damage-inducible protein CinA C-terminal domain-containing protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
competence/damage-inducible protein CinA C-terminal domain-containing protein; K03742 competence/damage-inducible protein CinA id=12554175 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
competence/damage-inducible protein CinA C-terminal domain-containing protein
13_1_40cm_3_scaffold_4830_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(902..1366)
DNA (465bp) protein (155aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] id=12554176 bin=CNBR_ACIDO species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphatidylglycerophosphatase A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
phosphatidylglycerophosphatase A
13_1_40cm_3_scaffold_4830_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1371..2273)
DNA (903bp) protein (301aa)
hypothetical protein id=14625969 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RDD domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_4830_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2270..3082)
DNA (813bp) protein (271aa)
id=12554178 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12554178 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_4830_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3214..4113
DNA (900bp) protein (300aa)
glutamate formiminotransferase; K00603 glutamate formiminotransferase [EC:2.1.2.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glutamate formiminotransferase (EC:4.3.1.4)
Glutamate formiminotransferase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T6Z5_THEIA
13_1_40cm_3_scaffold_4830_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4223..5617)
DNA (1395bp) protein (465aa)
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX id=12554180 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
13_1_40cm_3_scaffold_4830_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5693..8020)
DNA (2328bp) protein (776aa)
PAS/PAC sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] id=12554181 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
sensor histidine kinase (EC:2.7.13.3)
ntrY; nitrogen regulation sensor histidine kinase NtrY Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_4830_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8173..8799)
DNA (627bp) protein (209aa)
id=12554182 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12554182 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_4830_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8807..9238)
DNA (432bp) protein (144aa)
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR id=12554183 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nrdR; transcriptional regulator NrdR
Displaying 9 items

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