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13_1_40cm_3_scaffold_5889

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5889_1
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1068)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EDD11
Permease {ECO:0000313|EMBL:AKF83558.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124
efflux ABC transporter inner membrane protein
13_1_40cm_3_scaffold_5889_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1226..1600)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST7_KORVE
Glyoxalase {ECO:0000313|EMBL:KGM55578.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;
hypothetical protein
13_1_40cm_3_scaffold_5889_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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1743..2216
DNA (474bp) protein (158aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Thioredoxin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJW5_9BACT
Thioredoxin
13_1_40cm_3_scaffold_5889_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2334..3944
DNA (1611bp) protein (537aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:CDM64699.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CDM64699.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdi
Amidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX51_CORCM
gatA2; amidase
13_1_40cm_3_scaffold_5889_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4435..5169)
DNA (735bp) protein (245aa)
hypothetical protein; K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=1870896 bin=GWB2_Proteobacteria_55_19 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_1_40cm_3_scaffold_5889_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

5193..5708
DNA (516bp) protein (172aa)
GCN5-related N-acetyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E8_SOLUE
N-acetyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
N-acetyltransferase
13_1_40cm_3_scaffold_5889_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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5878..6252
DNA (375bp) protein (125aa)
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
4Fe-4S ferredoxin id=12555456 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
4Fe-4S ferredoxin
13_1_40cm_3_scaffold_5889_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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6343..7092
DNA (750bp) protein (250aa)
exodeoxyribonuclease III Xth (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
exodeoxyribonuclease III Xth (EC:3.1.11.2)
Exodeoxyribonuclease III Xth n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB53_ANASK
13_1_40cm_3_scaffold_5889_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

7215..8441
DNA (1227bp) protein (409aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
aspartokinase (EC:2.7.2.4)
aspartate kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744EE8 rbh
13_1_40cm_3_scaffold_5889_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8589..9851
DNA (1263bp) protein (421aa)
peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4] id=24533235 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase T
13_1_40cm_3_scaffold_5889_11
unknown

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comp(10710..10838)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 11 items

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