ggKbase home page

13_1_40cm_3_scaffold_670

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_670_1
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(314..2026)
DNA (1713bp) protein (571aa)
ATP-binding cassette, sub-family B (MDR/TAP), member 10 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092U1_STIAD rbh
efflux ABC transporter permease/ATP-binding protein
ATP-binding cassette, sub-family B (MDR/TAP), member 10 {ECO:0000313|EMBL:EAU66742.1}; Efflux ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:ADO69461.1}; TaxID=378806 species="Bacteri
13_1_40cm_3_scaffold_670_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2221..3036
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) RepID=D3UI68_HELM1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_3_scaffold_670_3
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3110..3844
DNA (735bp) protein (245aa)
PE-PGRS family protein {ECO:0000313|EMBL:CRG32306.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="My
13_1_40cm_3_scaffold_670_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3848..4225)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DC96_BRAJP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_670_5
unknown

Not on your lists

comp(4212..4406)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_3_scaffold_670_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4719..5225)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YD45_9FIRM
PgpB; membrane-associated phospholipid phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
putative phosphatase
13_1_40cm_3_scaffold_670_7
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(5239..5868)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037671DB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP12669.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
13_1_40cm_3_scaffold_670_8
R_OD1_56_18, Parcubacteria, Bacteria

Not on your lists

comp(6033..6800)
DNA (768bp) protein (256aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YLU4_9BACT
phytanoyl-CoA dioxygenase Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
phytanoyl-CoA dioxygenase
13_1_40cm_3_scaffold_670_9
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6800..7765)
DNA (966bp) protein (322aa)
Sugar phosphotransferase n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1YTF9_9MICC
SC1C3.11; hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
cpsY; exopolysaccharide phosphotransferase CpsY
13_1_40cm_3_scaffold_670_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7729..8415)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037564AF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_3_scaffold_670_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8427..9560)
DNA (1134bp) protein (378aa)
glycosyl transferase, group 1 family protein; K08256 phosphatidylinositol alpha-mannosyltransferase [EC:2.4.1.57] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Glycosyl transferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2S2_THERP
glycosyl transferase family protein
13_1_40cm_3_scaffold_670_12
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9593..11449
DNA (1857bp) protein (619aa)
Probable potassium transport system protein kup n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=KUP_MYXXD
kup; potassium uptake protein
Probable potassium transport system protein kup {ECO:0000255|HAMAP-Rule:MF_01522}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; M
13_1_40cm_3_scaffold_670_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11460..11828)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN80_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58742.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
13_1_40cm_3_scaffold_670_14
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11901..12530)
DNA (630bp) protein (210aa)
Dienelactone hydrolase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HJQ6_CYAP4
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:ACL45009.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC
13_1_40cm_3_scaffold_670_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12587..14680)
DNA (2094bp) protein (698aa)
Erythromycin esterase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VPB6_POLNA rbh
erythromycin esterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
erythromycin esterase
13_1_40cm_3_scaffold_670_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14716..16311
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI000366B952
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_3_scaffold_670_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16579..18648
DNA (2070bp) protein (690aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI5_RHOM4
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACY47178.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
13_1_40cm_3_scaffold_670_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18736..19650
DNA (915bp) protein (305aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029Z0_SOLUE
BNR repeat-containing glycosyl hydrolase
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:ABJ82136.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candid
Displaying 18 items

View Taxonomy