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13_1_40cm_3_scaffold_6580

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6580_1
unknown

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1..69
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

13_1_40cm_3_scaffold_6580_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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151..618
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CE16_ACAM1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_3_scaffold_6580_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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615..2360
-----------------
DNA (1746bp)
protein (582aa)
outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
outer membrane protein id=12554202 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
outer membrane protein
13_1_40cm_3_scaffold_6580_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2335..3672
-----------------
DNA (1338bp)
protein (446aa)
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
macA; acrolide-specific efflux protein MacA id=12554203 bin=CNBR_ACIDO species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
macA; acrolide-specific efflux protein MacA
13_1_40cm_3_scaffold_6580_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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3719..5152
-----------------
DNA (1434bp)
protein (478aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12554204 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acriflavin resistance protein
13_1_40cm_3_scaffold_6580_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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5133..6812
-----------------
DNA (1680bp)
protein (560aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12554204 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acriflavin resistance protein
13_1_40cm_3_scaffold_6580_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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7027..8760
-----------------
DNA (1734bp)
protein (578aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=12554205 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
RND family efflux transporter MFP subunit
13_1_40cm_3_scaffold_6580_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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8870..9622
-----------------
DNA (753bp)
protein (251aa)
ybbA; transporter subunit: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC-type antimicrobial peptide transport system,ATPase component id=12554206 bin=CNBR_ACIDO species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ybbA; transporter subunit: ATP-binding component of ABC superfamily
13_1_40cm_3_scaffold_6580_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9822..11039
-----------------
DNA (1218bp)
protein (406aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein; K02004 putative ABC transport system permease protein id=12554207 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
multidrug ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_6580_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11043..12224
-----------------
DNA (1182bp)
protein (394aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G433_GEOUR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ26551.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source=
13_1_40cm_3_scaffold_6580_11
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

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12221..12859
-----------------
DNA (639bp)
protein (213aa)
Acriflavin resistance protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9Q7U6_9NOSO
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AFY41750.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
Displaying 11 items

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