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13_1_40cm_3_scaffold_702

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_702_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3..320)
DNA (318bp) protein (106aa)
fimbrial protein pilin; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
type II secretion system protein G; K02456 general secretion pathway protein G id=12554090 bin=CNBR_ACIDO species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
general secretion pathway protein GspG
13_1_40cm_3_scaffold_702_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(483..950)
DNA (468bp) protein (156aa)
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative secretion protein; K02456 general secretion pathway protein G id=12554091 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
general secretion pathway protein G
13_1_40cm_3_scaffold_702_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(947..2704)
DNA (1758bp) protein (586aa)
type II and III secretion system protein; K02453 general secretion pathway protein D Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
type II secretory pathway, component PulD id=12554092 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
type II and III secretion system protein
13_1_40cm_3_scaffold_702_4
unknown

Not on your lists

2709..3497
DNA (789bp) protein (263aa)

This feature has no annotations

13_1_40cm_3_scaffold_702_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3509..4099)
DNA (591bp) protein (197aa)
id=12554093 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_702_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4089..4667)
DNA (579bp) protein (193aa)
id=12554094 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12554094 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_702_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4664..5266)
DNA (603bp) protein (201aa)
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN id=12554095 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_702_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5263..6234)
DNA (972bp) protein (324aa)
Competence protein A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein; K02662 type IV pilus assembly protein PilM id=12554096 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_702_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6231..7886)
DNA (1656bp) protein (552aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=12554097 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
type II secretion system protein E
13_1_40cm_3_scaffold_702_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7893..9101)
DNA (1209bp) protein (403aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
type II secretion system protein; K02653 type IV pilus assembly protein PilC id=12554098 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
type II secretion system protein
13_1_40cm_3_scaffold_702_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9314..9979)
DNA (666bp) protein (222aa)
lytic transglycosylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
lytic transglycosylase id=12554099 bin=CNBR_ACIDO species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lytic transglycosylase
13_1_40cm_3_scaffold_702_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10033..10914)
DNA (882bp) protein (294aa)
id=12554100 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12554100 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_702_13
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10939..12288)
DNA (1350bp) protein (450aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
Putative uncharacterized protein id=4162980 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
13_1_40cm_3_scaffold_702_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12353..13255)
DNA (903bp) protein (301aa)
id=12554100 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12554100 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_702_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13453..13812
DNA (360bp) protein (120aa)
eutM; putative ethanolamine utilization protein EutM Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
microcompartments protein id=12554101 bin=CNBR_ACIDO species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
carboxysome structural protein EutM
13_1_40cm_3_scaffold_702_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13903..15654
DNA (1752bp) protein (584aa)
acetaldehyde dehydrogenase; K00132 acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] id=12554102 bin=CNBR_ACIDO species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
acetaldehyde dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acetaldehyde dehydrogenase
13_1_40cm_3_scaffold_702_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15737..16807
DNA (1071bp) protein (357aa)
lytic transglycosylase, catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
lytic transglycosylase, catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] id=12554103 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lytic transglycosylase, catalytic
13_1_40cm_3_scaffold_702_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

16788..17525
DNA (738bp) protein (246aa)
lytic transglycosylase, catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
lytic transglycosylase, catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] id=12554103 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lytic transglycosylase
Displaying 18 items

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