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13_1_40cm_3_scaffold_6827

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6827_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
Sporulation domain-containing protein; K03749 DedD protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_6827_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(271..1872)
DNA (1602bp) protein (534aa)
TPR repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=12555968 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
hypothetical protein
13_1_40cm_3_scaffold_6827_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1962..2558)
DNA (597bp) protein (199aa)
id=12555969 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12555969 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_6827_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

2578..3120
DNA (543bp) protein (181aa)
Molybdenum cofactor guanylyltransferase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CF19_DESTA
mobA1; molybdopterin-guanine dinucleotide biosynthesis protein MobA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
molybdopterin-guanine dinucleotide biosynthesis protein A
13_1_40cm_3_scaffold_6827_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

3172..5172
DNA (2001bp) protein (667aa)
arginine--tRNA ligase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=12555971 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
arginyl-tRNA synthetase (EC:6.1.1.19)
13_1_40cm_3_scaffold_6827_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5175..5870
DNA (696bp) protein (232aa)
peptidase C26 n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B576CD
peptidase C26; K07010 putative glutamine amidotransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase C26
13_1_40cm_3_scaffold_6827_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6153..7406)
DNA (1254bp) protein (418aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
deoxyribonuclease; K00599 [EC:2.1.1.-] id=12555978 bin=CNBR_ACIDO species=Frankia sp. BMG5.12 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
13_1_40cm_3_scaffold_6827_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7699..8406)
DNA (708bp) protein (236aa)
id=12555979 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_3_scaffold_6827_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8522..9016)
DNA (495bp) protein (165aa)
coaX; type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) (EC:2.7.1.33) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
coaX; type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT7_9BACT
13_1_40cm_3_scaffold_6827_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9043..9249)
DNA (207bp) protein (69aa)
coaX; type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) (EC:2.7.1.33) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Type III pantothenate kinase n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=COAX_EXISA
Baf family transcriptional acitvator
13_1_40cm_3_scaffold_6827_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9315..10250)
DNA (936bp) protein (312aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RIFCSPLOWO2_02_FULL_Acidobacteri
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] id=12555980 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
biotin--acetyl-CoA-carboxylase ligase
13_1_40cm_3_scaffold_6827_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10282..11034)
DNA (753bp) protein (251aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NN76_MARHT
Displaying 12 items

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