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13_1_40cm_3_scaffold_6912

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6912_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(3..482)
DNA (480bp) protein (160aa)
id=12554635 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_3_scaffold_6912_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(487..2175)
DNA (1689bp) protein (563aa)
Amidohydrolase 3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL06_KORVE
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABF42444.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_40cm_3_scaffold_6912_3
unknown

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2275..2616
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_3_scaffold_6912_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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2629..3063
DNA (435bp) protein (145aa)
CoA-binding domain protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D4X1_PAESJ
CoA-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
CoA-binding protein
13_1_40cm_3_scaffold_6912_5
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(3079..3291)
DNA (213bp) protein (71aa)
pepF; oligoendopeptidase F PepF; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Oligoendopeptidase F n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B071_9BACT
oligoendopeptidase F
13_1_40cm_3_scaffold_6912_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(3291..4895)
DNA (1605bp) protein (535aa)
pepF; oligoendopeptidase F PepF; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pepF; oligoendopeptidase F PepF; K08602 oligoendopeptidase F [EC:3.4.24.-] id=12554698 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
oligoendopeptidase F
13_1_40cm_3_scaffold_6912_7
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4961..5524
DNA (564bp) protein (188aa)
PRC-barrel domain protein {ECO:0000313|EMBL:EGK08467.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp
13_1_40cm_3_scaffold_6912_8
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(5505..5783)
DNA (279bp) protein (93aa)
pseudouridine synthase, rsuA family (EC:5.4.99.-); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=GWA1_Bdellovibrionales_52_35_curated
pseudouridine synthase, rsuA family (EC:5.4.99.-)
Pseudouridine synthase id=2881735 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
13_1_40cm_3_scaffold_6912_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(5985..7325)
DNA (1341bp) protein (447aa)
beta-lactamase class A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
beta-lactamase id=24425454 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
beta-lactamase
13_1_40cm_3_scaffold_6912_10

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comp(7322..8218)
DNA (897bp) protein (299aa)
hsaD; 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase (EC:3.7.1.17)
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) n=1 Tax=uncultured Chloroflexi bacterium HF0770_09E03 RepID=E0XYP4_9CHLR
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:ADI19535.1}; TaxID=710738 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chlo
13_1_40cm_3_scaffold_6912_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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8439..9176
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BH68_CHLPD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_3_scaffold_6912_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9157..9663)
DNA (507bp) protein (169aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB72_GEMAT
phosphodiesterase, MJ0936 family
13_1_40cm_3_scaffold_6912_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(9866..10645)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC630
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_6912_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(10773..12041)
DNA (1269bp) protein (423aa)
Major facilitator superfamily MFS_1 n=2 Tax=Chloroflexus RepID=A9WAF7_CHLAA id=5225037 bin=16ft_combo_ws3_JS1 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
major facilitator superfamily protein
Displaying 14 items

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