ggKbase home page

13_1_40cm_3_scaffold_7164

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_7164_1
unknown

Not on your lists

1..117
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_3_scaffold_7164_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

114..851
DNA (738bp) protein (246aa)
tal; transaldolase (EC:2.2.1.2) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
tal; transaldolase (EC:2.2.1.2)
Transaldolase id=2211029 bin=GWB2_Proteobacteria_55_19 species=Leptospirillum rubarum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
13_1_40cm_3_scaffold_7164_3
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

848..2290
DNA (1443bp) protein (481aa)
ADP-heptose synthase (EC:2.7.-.-)
ADP-heptose synthase Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
ADP-heptose synthase id=4585818 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_3_scaffold_7164_4
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2290..3228
DNA (939bp) protein (313aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3CZG7_9BURK rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJL81421.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbasp
NAD-dependent epimerase/dehydratase
13_1_40cm_3_scaffold_7164_5
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3322..4605
DNA (1284bp) protein (428aa)
UDP-galactopyranose mutase-like protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXU5_DESFR
UDP-galactopyranose mutase-like protein {ECO:0000313|EMBL:EFL50868.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" so
UDP-galactopyranose mutase
13_1_40cm_3_scaffold_7164_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

4675..5400
DNA (726bp) protein (242aa)
xylose isomerase domain-containing protein id=3745139 bin=GWF2_Lentisphaerae_49_21 species=Anabaena sp. 90 genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
xylose isomerase domain-containing protein Tax=GWF2_Lentisphaerae_49_21_curated
13_1_40cm_3_scaffold_7164_7
unknown

Not on your lists

comp(5339..5812)
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_3_scaffold_7164_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5895..7703
DNA (1809bp) protein (603aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
multi-sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C53D1
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_3_scaffold_7164_9
unknown

Not on your lists

comp(7704..7997)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_3_scaffold_7164_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8202..8405
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_3_scaffold_7164_11
unknown

Not on your lists

8524..8688
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_3_scaffold_7164_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8860..10041)
DNA (1182bp) protein (394aa)
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
major facilitator superfamily transporter; K08151 MFS transporter, DHA1 family, tetracycline resistance protein id=14631585 bin=bin9_gal15 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
major facilitator superfamily transporter
13_1_40cm_3_scaffold_7164_13
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10089..10448
DNA (360bp) protein (120aa)
ggt; gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:BAI98543.1}; EC=2.3.2.2 {ECO:0000313|EMBL:BAI98543.1};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
Gamma-glutamyltranspeptidase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z7S4_SPHJU
Displaying 13 items

View Taxonomy