ggKbase home page

13_1_40cm_3_scaffold_897

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_897_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..861)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022C2_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_897_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(968..2803)
DNA (1836bp) protein (612aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022C2_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_897_3
unknown

Not on your lists

comp(2971..4401)
DNA (1431bp) protein (477aa)

This feature has no annotations

13_1_40cm_3_scaffold_897_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(4443..4928)
DNA (486bp) protein (162aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_3_scaffold_897_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(5261..6691)
DNA (1431bp) protein (477aa)
Amidase (EC:3.5.1.4); K01426 amidase [EC:3.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Amidase (EC:3.5.1.4)
Amidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA12_SPHTD
13_1_40cm_3_scaffold_897_6

Not on your lists

comp(6667..7593)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B39FCA
Marine sediment metagenome DNA, contig: S01H1_C00193 {ECO:0000313|EMBL:GAF73432.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_3_scaffold_897_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7937..8305)
DNA (369bp) protein (123aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative uncharacterized protein id=1872085 bin=GWB2_Proteobacteria_55_19 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
13_1_40cm_3_scaffold_897_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8332..9558)
DNA (1227bp) protein (409aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Polaromonas sp. CF318 RepID=J2LIU3_9BURK rbh
beta-lactamase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
beta-lactamase
13_1_40cm_3_scaffold_897_9
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(9555..10121)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00030D5052
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
hypothetical protein
13_1_40cm_3_scaffold_897_10
unknown

Not on your lists

10173..10508
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_3_scaffold_897_11
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10509..11255)
DNA (747bp) protein (249aa)
Abortive infection protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8S2_GEODF
Abortive infection protein
Membrane metalloprotease, putative {ECO:0000313|EMBL:ACM20418.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacte
13_1_40cm_3_scaffold_897_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11362..12789)
DNA (1428bp) protein (476aa)
Dihydroorotase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM59_KORVE
D-glutamate deacylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
D-glutamate deacylase
13_1_40cm_3_scaffold_897_13

Not on your lists

comp(13159..13455)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPM3_KORVE
Marine sediment metagenome DNA, contig: S03H2_S04854 {ECO:0000313|EMBL:GAH58941.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_3_scaffold_897_14
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13471..13965)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003676F9E
Acetyltransferase {ECO:0000313|EMBL:KHA76293.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium li
GCN5-related N-acetyltransferase
Displaying 14 items

View Taxonomy