ggKbase home page

13_1_40cm_3_scaffold_11927_6

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: 2988..4079

Top 3 Functional Annotations

Value Algorithm Source
Smf; Rossmann fold nucleotide-binding protein; K04096 DNA processing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 354.0
  • Bit_score: 493
  • Evalue 1.90e-136
smf; protein Smf; K04096 DNA processing protein id=12555758 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 359.0
  • Bit_score: 313
  • Evalue 3.20e-82
DNA protecting protein DprA similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 357.0
  • Bit_score: 270
  • Evalue 8.80e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGACCGATCTGCAGAATCTCGTCGCGTTATCGCTCCTTCCGTCGTGGTCTTGGCTGCACGCCGCTGAACACCTGCGCGCGGGCGATACAGCCGGCGCGGCACTCCAACGCCTGCTCATCGAGCATTGGCGCGATCAGCCCGACAAAGCGGCGACGCTCCAGACCCGCGCGGTGGCGGCGATTCGCCGTGCGGAGGAGCACGGAATCGCTGCGGTGCCGTGGAGCGATGCGCGATATCCCGCGGCACTCACGACGATCGTCGATCCGCCTCCGGTGCTCTGGGTGCGCGGCGTTGTCGACGCGCTGAGCGCGCACGCGGTGGCTATCGTCGGATCGCGTGCGGGAACGCCGTACGCGCTCGCCGTTGCCGAGCGGCTCGCCGCCGATCTTGCCGCGCGTGGCGTCGTGATTGTCAGCGGGCTCGCGCGCGGCGTCGATTCCGCGGCGCATCGTGGCGCACTGACCGGCGGCGCGACCGTGGCGGTCCTCGGCTCGGGCGTCGACGTGTTGTATCCGCCCGAACACGCGCCGCTCGCGCGTGAGATCGAGAAGGAGGGCGCCGTCATCAGCGAGCTCGTGCCGGGCACACCGCCGCAGCAGTGGTTCTTTCCGCTGCGGAATCGGATCATCAGCGGACTGTCGCGCGCGGTGGTCGTGATCGAGGCCGGCGAAAAGAGCGGTTCGCTCATTACGGCGCGCTGCGCGCTCGAGCAGGGCCGCGACGTGCTGGCCGTCCCAGGCAACGTCCTGAGCGGCCGTAACCGCGGTGCCCATGCCCTGTTACGCGACGGTGCAAAGATTGTGGAGTCCGCGGACGATATTCTGGAAGAGCTGCAGATGTGCGCGCCAGCCCGGCCGCCCGGAACACGCTCGGCCGCGCCGCCGGTGGACCCGATTCTTGCCTGCCTGACGCCGGGCGAGCCGAGTGATCTCGACGCGCTGGCCGAGCGATCGGGGCTCAGTCCGTCGCGGTTGTTGCCTCGACTATTCGAGCTGGAATTGCAGGGATCGGTGGCGCGTGTGGGCGGCGGCCGATTCGTCCGGGTTGACAGTTCGTGCTACGGTGGAAATACGGACCTCGGTGAAGGCTAA
PROTEIN sequence
Length: 364
MTDLQNLVALSLLPSWSWLHAAEHLRAGDTAGAALQRLLIEHWRDQPDKAATLQTRAVAAIRRAEEHGIAAVPWSDARYPAALTTIVDPPPVLWVRGVVDALSAHAVAIVGSRAGTPYALAVAERLAADLAARGVVIVSGLARGVDSAAHRGALTGGATVAVLGSGVDVLYPPEHAPLAREIEKEGAVISELVPGTPPQQWFFPLRNRIISGLSRAVVVIEAGEKSGSLITARCALEQGRDVLAVPGNVLSGRNRGAHALLRDGAKIVESADDILEELQMCAPARPPGTRSAAPPVDPILACLTPGEPSDLDALAERSGLSPSRLLPRLFELELQGSVARVGGGRFVRVDSSCYGGNTDLGEG*