ggKbase home page

13_1_40cm_3_scaffold_2100_3

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: 2095..2715

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide biosynthesis/export protein; K01991 polysaccharide export outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 167.0
  • Bit_score: 252
  • Evalue 7.00e-64
Putative Polysaccharide export protein id=4972193 bin=GWA2_OP3_52_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 207.0
  • Bit_score: 154
  • Evalue 1.10e-34
polysaccharide biosynthesis/export protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 167.0
  • Bit_score: 152
  • Evalue 1.50e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_68_18 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGAATCGTCGGCTAGCAGCTGCCATCCTCATGTGCGTGTCGCTGACGGCGACCGCGTGGGCCCAGCCACCAACTGACCGCACGCCGAACGACCGCGCGCCCGAGACGGGCAGCGAGGCGATCGCCGTCGATCCGCGCGGCGCCGCCTATCTGATCGGACCCGAGGACATTCTCGACGTCCTGGTGTGGAAGAACGCGGATCTCAGTCGAACGGTTCCGGTCCGTCCTGACGGCAAGGTGTCGCTGCCGCTCGTCAACGACATTCAGGCCGCCGGCCTGACGCCGACCCAACTGCGCGAGCAGCTCACCAAGCGGCTCTCGGAGTACGTGGAATCGCCGGAGGTCTCGGTGATCATCCGCGAGGTGCACAGCGTCAAGGTGGCGGTGGTCGGCGCCGTCAAGGTGCCGGGCCGCTACGAGGTCAAGAGCCCGGCGACCGTGCTCGAGCTGATCGCTCAGGCGCAGGGGCTCACCGAGTTCGCGTCGCGCGATCACATCCTCGTCATCCGCCAGAACGGAGGTACGACGACGCGCGTGCCGTTCAATTACCGGAAGGCCGCCGAGGGATCGGAGAAAGACAACTTCTTCGTCCGCGCCGGCGACATCATCTTCGTGCCCTGA
PROTEIN sequence
Length: 207
MNRRLAAAILMCVSLTATAWAQPPTDRTPNDRAPETGSEAIAVDPRGAAYLIGPEDILDVLVWKNADLSRTVPVRPDGKVSLPLVNDIQAAGLTPTQLREQLTKRLSEYVESPEVSVIIREVHSVKVAVVGAVKVPGRYEVKSPATVLELIAQAQGLTEFASRDHILVIRQNGGTTTRVPFNYRKAAEGSEKDNFFVRAGDIIFVP*