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13_1_40cm_3_scaffold_2100

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2100_1
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

306..914
DNA (609bp) protein (203aa)
Transcription termination/antitermination protein nusG n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVW1_SYNAS
NusG antitermination factor Tax=RBG_13_Deltaproteobacteria_58_19_curated
transcription antitermination protein
13_1_40cm_3_scaffold_2100_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

923..2098
DNA (1176bp) protein (392aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_3_scaffold_2100_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2095..2715
DNA (621bp) protein (207aa)
polysaccharide biosynthesis/export protein; K01991 polysaccharide export outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Putative Polysaccharide export protein id=4972193 bin=GWA2_OP3_52_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
polysaccharide biosynthesis/export protein
13_1_40cm_3_scaffold_2100_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2726..4345
DNA (1620bp) protein (540aa)
Chain length determinant protein, Wzz-like protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVT5_SYNAS
chain length determinant protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
chain length determinant protein
13_1_40cm_3_scaffold_2100_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4352..5059
DNA (708bp) protein (236aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q098D6_STIAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_3_scaffold_2100_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5090..6373
DNA (1284bp) protein (428aa)
Bacterial sugar transferase domain protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1A8Q9_9ZZZZ
sugar transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_3_scaffold_2100_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

6379..7743
DNA (1365bp) protein (455aa)
wzy family polymerase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
wzy family polymerase id=12557456 bin=CNBR_ACIDO species=Marichromatium purpuratum genus=Marichromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-antigen polymerase
13_1_40cm_3_scaffold_2100_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7740..11222
DNA (3483bp) protein (1161aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDL6_ANADF
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_40cm_3_scaffold_2100_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11219..11986
DNA (768bp) protein (256aa)
Cellulose biosynthesis protein CelD (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AJ35_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Protein involved in cellulose biosynthesis (CelD)
13_1_40cm_3_scaffold_2100_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11947..12309
DNA (363bp) protein (121aa)
Cellulose biosynthesis protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PCK3_9DELT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cellulose biosynthesis (CelD)-like protein
13_1_40cm_3_scaffold_2100_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12299..13396
DNA (1098bp) protein (366aa)
Polysaccharide deacetylase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q7R1_9DELT
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
polysaccharide deacetylase
13_1_40cm_3_scaffold_2100_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

13393..14883
DNA (1491bp) protein (497aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDL1_ANADF
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_3_scaffold_2100_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

14918..16834
DNA (1917bp) protein (639aa)
Asparagine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLR4_SINAD
asparagine synthase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
Displaying 13 items

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