ggKbase home page

13_1_40cm_3_scaffold_2356_20

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(22258..23664)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 466.0
  • Bit_score: 682
  • Evalue 3.70e-193
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=12556632 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 469.0
  • Bit_score: 543
  • Evalue 2.50e-151
  • rbh
UDP-N-acetylmuramate--L-alanine ligase similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 471.0
  • Bit_score: 459
  • Evalue 1.00e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
GGCATCGGGATGAGCGGCATCGCGGAACTGCTGGCGAATCTCGGCTTCGTCGTCAGCGGATCCGACATAAAGCGCTCGGCGGTGACCGATCGGCTGGAGACGCTGGGAATCCGGGTCGCGGTCGGACACGACGCGGCGCACGTCGGCGAGGCGGACGTCGTGGTGGTGTCGTCGGCCGTCCGGTCATCGAACGCGGAAGTGATCGAAGCGGCGCGGCGGCAGATACCGGTGATCCCGCGGGCCGAGATGCTCGCGGAGCTGATGCGGTTGCGGTTCGCGATCGCGGTCGCGGGCGCGCACGGGAAGACGACGACGACGTCGATGATCGCGCTCGTGCTGGAGCGCGCGGGACTGGATCCGACGGCGGTGATAGGCGGGCGGCTGAGCGCGTTCGGAAGCAATGCGCGGCTCGGCAAGGGCGAGCATCTGGTGGCCGAAGCGGACGAGAGCGATCGGTCGTTTTTGAAATTGTTTCCGACGATTGCGGTGATTACGAACATCGACCACGAACATCTCGAAAACTACGGCGGCTTCGACGATCTGCTGCAGGCGTTCGTCGACTTCGCCAACAAAGTGCCGTTCTACGGCGGCGTGGTCGCGTGCCTCGACGACCCGAATCTCGCCGGCATCCTGCCGCGGATGACGCGCCGCGTGACGACGTACGGGCTGAACTCCGCCGATGCGGATCTCATTGCCACCGACGTCGAGCTCGGCCCGCTGAGCGCGAAGGCGACGGTCAAGCGACGCGATCGGCGCGAGCGTGGCTCGACCCGCCGACCCGCTCAGGGCTCACGACAAGCCGGCGGAAGCGATCCACAACAGACGCACGCCTCGCTCGGCACGTTGTCGCTCGCCGTGCCCGGCCGCCACAACCTCCAGAACGCGCTGGCGGCGGTCGCGGTCGGGATGGAGCTCGGGCTGCGGTTCGATCGCGTCGCTGAAGGGCTGCGCGACTTCCGCGGCGCCGAGCGGCGATTCGACGTCAAGGGCGAACCGAACGGCATCCTCGTCGTCGACGACTACGGGCATCACCCGACCGAAATCGCCGCGGTGCTCGCTGCCGCGCGAACGCTGAATCGCCGCGTCGTCGTCGCCTTTCAGCCGCATCGCTACACACGCACCGCGTCGCTGATGGACGCGTTCGGCCCGGCGCTGTCGGGTGCCGATCACATCGTGCTGACGGACATTTATCCGGCGAACGAGGATCCGATTCCCGGTGTCACGCTCGACACGCTGGCCTCGGCGATCCGTCGGAGCGTCACCGTACCACTCGACGTGGCGCCGAAGCTCGACGACGTCGTCGCAGCGATCGCGCGGATCGCGAAGCCCGGGGACGTCGTGATCACGCTCGGCGCGGGATCGATCGGCAGCGTGCCGGACCGGTTGCTCGAGGTGCTCAAGTCATGA
PROTEIN sequence
Length: 469
GIGMSGIAELLANLGFVVSGSDIKRSAVTDRLETLGIRVAVGHDAAHVGEADVVVVSSAVRSSNAEVIEAARRQIPVIPRAEMLAELMRLRFAIAVAGAHGKTTTTSMIALVLERAGLDPTAVIGGRLSAFGSNARLGKGEHLVAEADESDRSFLKLFPTIAVITNIDHEHLENYGGFDDLLQAFVDFANKVPFYGGVVACLDDPNLAGILPRMTRRVTTYGLNSADADLIATDVELGPLSAKATVKRRDRRERGSTRRPAQGSRQAGGSDPQQTHASLGTLSLAVPGRHNLQNALAAVAVGMELGLRFDRVAEGLRDFRGAERRFDVKGEPNGILVVDDYGHHPTEIAAVLAAARTLNRRVVVAFQPHRYTRTASLMDAFGPALSGADHIVLTDIYPANEDPIPGVTLDTLASAIRRSVTVPLDVAPKLDDVVAAIARIAKPGDVVITLGAGSIGSVPDRLLEVLKS*