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13_1_40cm_3_scaffold_2356

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2356_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1..381)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXA7_HALO1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_3_scaffold_2356_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(388..1890)
DNA (1503bp) protein (501aa)
group 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glycosyl transferase family protein id=12556618 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
group 2 glycosyl transferase
13_1_40cm_3_scaffold_2356_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1931..2692
DNA (762bp) protein (254aa)
hypothetical protein; K06898 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=8266724 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes) rbh
hypothetical protein
13_1_40cm_3_scaffold_2356_4
unknown

Not on your lists

comp(2683..3909)
DNA (1227bp) protein (409aa)

This feature has no annotations

13_1_40cm_3_scaffold_2356_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3926..5146
DNA (1221bp) protein (407aa)
MutS2 family protein; K07456 DNA mismatch repair protein MutS2 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Smr protein/MutS2; K07456 DNA mismatch repair protein MutS2 id=12556620 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MutS2 family protein
13_1_40cm_3_scaffold_2356_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5146..6876
DNA (1731bp) protein (577aa)
DNA primase catalytic subunit (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA primase catalytic subunit (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] id=12556621 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA primase (EC:2.7.7.-)
13_1_40cm_3_scaffold_2356_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6885..8603
DNA (1719bp) protein (573aa)
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor id=12556622 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
sigma 38, RpoS
13_1_40cm_3_scaffold_2356_trna_1
unknown

Not on your lists

8694..8766
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_2356_8
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(9041..11407)
DNA (2367bp) protein (789aa)
Macrolide transporter ATP-binding /permease protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QSA7_9CYAN
macrolide transporter ATP-binding/permease protein
Macrolide transporter ATP-binding /permease protein {ECO:0000313|EMBL:AGY60600.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter ki
13_1_40cm_3_scaffold_2356_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11492..12250
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IH82_KORVE
hypothetical protein; K07164 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_3_scaffold_2356_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12273..12707
DNA (435bp) protein (145aa)
ribonuclease H; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Ribonuclease HI n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F185_ACIC5
Ribonuclease HI
13_1_40cm_3_scaffold_2356_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12786..13586)
DNA (801bp) protein (267aa)
Multi-copper polyphenol oxidoreductase, laccase; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K05810 conserved hypothetical protein id=12556625 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_2356_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

13750..14133
DNA (384bp) protein (128aa)
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZDA2_TERRK
holo-(acyl-carrier-protein) synthase
13_1_40cm_3_scaffold_2356_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

14605..14907
DNA (303bp) protein (101aa)
id=12556555 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
id=12556555 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_2356_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14980..16752)
DNA (1773bp) protein (591aa)
radical SAM domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Radical SAM domain protein id=1823465 bin=GWD2_Nitrospirae-related_57_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
radical SAM domain-containing protein
13_1_40cm_3_scaffold_2356_15
unknown

Not on your lists

comp(16869..17711)
DNA (843bp) protein (281aa)

This feature has no annotations

13_1_40cm_3_scaffold_2356_16
unknown

Not on your lists

comp(17720..18307)
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_40cm_3_scaffold_2356_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(18502..19914)
DNA (1413bp) protein (471aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division protein FtsZ; K03531 cell division protein FtsZ id=12556629 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell division protein FtsZ
13_1_40cm_3_scaffold_2356_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20073..20774)
DNA (702bp) protein (234aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division protein FtsA; K03590 cell division protein FtsA id=12556630 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell division protein FtsA
13_1_40cm_3_scaffold_2356_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21365..22261)
DNA (897bp) protein (299aa)
cell division septal protein-like; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division septal protein-like; K03589 cell division protein FtsQ id=12556631 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell division septal protein-like
13_1_40cm_3_scaffold_2356_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22258..23664)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=12556632 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
UDP-N-acetylmuramate--L-alanine ligase
Displaying 21 items

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