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13_1_40cm_3_scaffold_2960_5

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: 5287..6318

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator, LacI family; K05499 LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG id=12555394 bin=CNBR_ACIDO species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 325.0
  • Bit_score: 403
  • Evalue 1.70e-109
  • rbh
transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 341.0
  • Bit_score: 400
  • Evalue 4.10e-109
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACG78569.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 341.0
  • Bit_score: 400
  • Evalue 2.00e-108

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Taxonomy

Phenylobacterium zucineum → Phenylobacterium → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
GTGGCGAATATTTACGAAGTCGCAAAGCGCGCCGGCGTCTCGACCGCCACCGTCTCACGCGTCCTGAGCCAGCCCGACGTCGTCTCGCCCGACACGCGGCGCAAAGTGCTGCAGGCGGTCGAGCATCTCGGCTACACGCCGAACGCGGCCGCGAAAAATCTGCGCACGCTGCGTACCGGCAAGCTGCTCGTCACGGTCCCGGACATTTCCAATCCTTTTTTTTCGCTCATCCTTCAGGGGATTGAAGACTCGGCGCAGCGCGAAGGCTACTCGGTCCTGGTCGGCGACACGCAGCACGACGAGCAGCGCGAGGAGCGCTACGCACTGATGCTGCGGCGGAAGGAAGCCGACGGGTTGATCTTTCTGGGCCACCGCCTGCCGAAAGAAGCGGCCACCTTTGCCGACACGATCGCGCCGCGTTGCGCGCCGGTCGTCAACGGCTGCGAGTTCAACCCGCGGCTCGGCGTCCCGAGCGTCCACATCGACAACGCCAAGGCATCGGCCGAGGCGATGGACCATCTCTATCGTCTCGGCCATCGCCGGATCGGCATCATCACCGGACCGCTCGTCAGCCCGCTCAGCCGCGATCGCCTGCGCGGCGCCACGGCTCGCGCGAAGACGCAAAAGGCCGAGCGCGACTTCGTCGTCATGAATGGCGACTTCTCGATCGAGTCCGGCGCGGCCGGCGCCGAGCGGCTGCTCGGACGCCGCGAGCCGCCGACGGCGATCTTCTGCTTCAACGACGAGATGGCGATGGGCGCGATCGAAACGGCGAAGCGGCGCGGGCTGCGCGTCCCGCTCGATCTGTCGATCGTCGGGTTCGACGACATCCGCTTCGCGCGGTGCGTCGACCCGCCGCTGACCACCGTCGCGCAGCCGATGCGCGCGATCGGCGAAGGCACGGTGCGATTGCTGCTGGAAATCCTGAACGGCGACGGCGAGCGCGCGCCCGAGTCGGTGACGCTGCCCCACACGCTGACGATCCGATCGAGCACGGCACCGCCACGGACGGGCTTTCGGTCCGGCCGCTAG
PROTEIN sequence
Length: 344
VANIYEVAKRAGVSTATVSRVLSQPDVVSPDTRRKVLQAVEHLGYTPNAAAKNLRTLRTGKLLVTVPDISNPFFSLILQGIEDSAQREGYSVLVGDTQHDEQREERYALMLRRKEADGLIFLGHRLPKEAATFADTIAPRCAPVVNGCEFNPRLGVPSVHIDNAKASAEAMDHLYRLGHRRIGIITGPLVSPLSRDRLRGATARAKTQKAERDFVVMNGDFSIESGAAGAERLLGRREPPTAIFCFNDEMAMGAIETAKRRGLRVPLDLSIVGFDDIRFARCVDPPLTTVAQPMRAIGEGTVRLLLEILNGDGERAPESVTLPHTLTIRSSTAPPRTGFRSGR*