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13_1_40cm_3_scaffold_3357_16

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(12533..12790)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029X0_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 71.0
  • Bit_score: 75
  • Evalue 2.70e-11
host factor Hfq; K03666 host factor-I protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 86.0
  • Bit_score: 123
  • Evalue 1.20e-25
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 71.0
  • Bit_score: 75
  • Evalue 7.50e-12

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGCTCCCGCCTCCGACTCGAAAGTTGCGCACGCGCAACCGAACATTCAAGACGTCTTCCTCAACTACGTGCGCCGCGAGAAGCTCACCATCACGATTCGCATGATGGATGGCACCGAGCTCGAAGGGCGCATCAAGAATTTCGATCGGTTCGCGCTCGTGCTCGATCAGGGCGGTACTGATCACATGATCTTCAAACACGCGATCGCGGCGATCAAGACGCCCAAGGCCGTCTCCAACTATTTCTCGCATCAGTAG
PROTEIN sequence
Length: 86
MAPASDSKVAHAQPNIQDVFLNYVRREKLTITIRMMDGTELEGRIKNFDRFALVLDQGGTDHMIFKHAIAAIKTPKAVSNYFSHQ*