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13_1_40cm_3_scaffold_7309_9

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: 6488..7123

Top 3 Functional Annotations

Value Algorithm Source
squalene synthase (EC:2.5.1.32) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 207.0
  • Bit_score: 287
  • Evalue 2.00e-74
squalene synthase (EC:2.5.1.32) id=12557179 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 201.0
  • Bit_score: 207
  • Evalue 1.90e-50
hpnC; squalene synthase HpnC (EC:2.4.1.21) similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 195.0
  • Bit_score: 171
  • Evalue 2.50e-40

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGCAGCGGCGGACCTGATCATCATCGCGGCCGCGCATTCGATTCGTACGCTCGATCTCCCGATCGCGTGGTTCGACGACCTGATCAGTGCGTTCGCGCAGGATATCACGACGACGCGCTACGCTTCGTGGGCCGACGTGTTCGATTACTGCCGGCGATCGGCGAATCCGATCGGGCGGCTCGTGCTGCGGATCGCCGGCTATCGCGACGATCGGCTCGATCGATCGTCGGATGCGGTGTGCACGGCCCTGCAGCTCACGAATTTCTGGCAGGACTTCGGACGCGACTGGCGGGCAGGACGCTTGTACGTGCCGCGCGAGGTGCTCGACGCCTGCGGCGCATCCGAGACCGATCTTGCGGCCGGTCCGCCCTGTCAGCTTGGCCGCGCGTGGCAGGAGGCGCTCGCGCGGTGCGTGGCCGTCACCGACGAGCAGTTCCGCCGCGGCCGCGACGTCTGCGATGGCGTCGGCGGTCGACTGCGCTACGAGCTGCGCGTCACCTGGCTCGGCGGCCGGCGGATCCTCAAACGGGTTGACGAGGCCCGCGCACATCTGCTCGACTACCGGCCCACCCTCGGCGCGCGCGACGTCCCGGCGATGCTGTGGCGCGCGGCCGTTTGGGGCTCGCGCGTGTAA
PROTEIN sequence
Length: 212
MAAADLIIIAAAHSIRTLDLPIAWFDDLISAFAQDITTTRYASWADVFDYCRRSANPIGRLVLRIAGYRDDRLDRSSDAVCTALQLTNFWQDFGRDWRAGRLYVPREVLDACGASETDLAAGPPCQLGRAWQEALARCVAVTDEQFRRGRDVCDGVGGRLRYELRVTWLGGRRILKRVDEARAHLLDYRPTLGARDVPAMLWRAAVWGSRV*