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13_1_40cm_3_scaffold_7309

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_7309_1
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(101..556)
DNA (456bp) protein (152aa)
pyridoxal-dependent decarboxylase (EC:4.1.1.28) Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036BB1E4
pyridoxal-dependent decarboxylase
13_1_40cm_3_scaffold_7309_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(685..2481)
DNA (1797bp) protein (599aa)
hypothetical protein; K06889 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
lipoprotein; K06889 id=12557184 bin=CNBR_ACIDO species=Asticcacaulis sp. AC466 genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
hypothetical protein
13_1_40cm_3_scaffold_7309_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2517..3542
DNA (1026bp) protein (342aa)
gcvT1; glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Aminomethyltransferase, putative id=1969972 bin=GWD2_Deltaproteobacteria_55_8 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
folate-binding protein YgfZ
13_1_40cm_3_scaffold_7309_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3740..4126)
DNA (387bp) protein (129aa)
mutT; mutator protein MutT (EC:3.6.1.-); K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
mutT; mutator protein MutT (EC:3.6.1.-); K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] id=12557182 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mutT; mutator protein MutT (EC:3.6.1.-)
13_1_40cm_3_scaffold_7309_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4199..4882)
DNA (684bp) protein (228aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] id=12557181 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
13_1_40cm_3_scaffold_7309_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4899..5435
DNA (537bp) protein (179aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ATP/cobalamin adenosyltransferase id=12557180 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP/cobalamin adenosyltransferase
13_1_40cm_3_scaffold_7309_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5520..6167)
DNA (648bp) protein (216aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_7309_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6279..6506
DNA (228bp) protein (76aa)
squalene synthase (EC:2.5.1.32) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
squalene synthase (EC:2.5.1.32) id=12557179 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
squalene synthase (EC:2.5.1.32)
13_1_40cm_3_scaffold_7309_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6488..7123
DNA (636bp) protein (212aa)
squalene synthase (EC:2.5.1.32) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
squalene synthase (EC:2.5.1.32) id=12557179 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hpnC; squalene synthase HpnC (EC:2.4.1.21)
13_1_40cm_3_scaffold_7309_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7123..7938
DNA (816bp) protein (272aa)
crtB; phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
squalene/phytoene synthase id=12557178 bin=CNBR_ACIDO species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
squalene/phytoene synthase
13_1_40cm_3_scaffold_7309_11
unknown

Not on your lists

comp(7854..9044)
DNA (1191bp) protein (397aa)

This feature has no annotations

13_1_40cm_3_scaffold_7309_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9402..10592
DNA (1191bp) protein (397aa)
thiI; thiamine biosynthesis protein thiI Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
thiI; thiamine biosynthesis protein thiI id=12557176 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiI; thiamine biosynthesis protein thiI
13_1_40cm_3_scaffold_7309_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10809..12257
DNA (1449bp) protein (483aa)
aldolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative fructose-bisphosphate aldolase id=8266785 bin=CD_OP8_4m species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
aldolase
13_1_40cm_3_scaffold_7309_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

12354..13154
DNA (801bp) protein (267aa)
Electron transport protein SCO1/SenC n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026W5_SOLUE
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ABJ82948.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solib
13_1_40cm_3_scaffold_7309_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13267..14991)
DNA (1725bp) protein (575aa)
TPR repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D43_SOLUE rbh
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:ABJ81023.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
Displaying 15 items

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