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13_2_20cm_scaffold_1034

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1034_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1..138)
DNA (138bp) protein (46aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003760664
Major facilitator family transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1034_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(131..1375)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7Y2_NATTJ
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_1034_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1691..2923)
DNA (1233bp) protein (411aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-isopropylmalate synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1034_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2977..4224
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI000370FF24
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AHG91478.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1034_5
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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comp(4221..5009)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2D3_9CYAN
short-chain dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFY76281.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
13_2_20cm_scaffold_1034_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5006..5491)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Nocardiopsis lucentensis RepID=UPI00034553B4
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KFA90523.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen
13_2_20cm_scaffold_1034_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5522..7105)
DNA (1584bp) protein (528aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R1_GEMAT rbh
multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:BAH37571.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
13_2_20cm_scaffold_1034_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7115..8158)
DNA (1044bp) protein (348aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R2_GEMAT
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AHG89973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1034_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8190..9521)
DNA (1332bp) protein (444aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R3_GEMAT
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89974.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1034_10
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9502..10152)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E19934
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF81779.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="He
TetR family transcriptional regulator
13_2_20cm_scaffold_1034_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10240..10554)
DNA (315bp) protein (105aa)
DinB family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFF0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
DinB family protein
13_2_20cm_scaffold_1034_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10749..11738)
DNA (990bp) protein (330aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC1_GEMAT
Nucleotidyl transferase
13_2_20cm_scaffold_1034_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11739..12089)
DNA (351bp) protein (117aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP2_ANADF
cupin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cupin
13_2_20cm_scaffold_1034_14
unknown

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12123..12218
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 14 items

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