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13_2_20cm_scaffold_1186

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1186_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..761)
DNA (759bp) protein (253aa)
Transcriptional regulator, SARP family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9Z3_ANAD2
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional activator domain-containing protein
13_2_20cm_scaffold_1186_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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823..3450
DNA (2628bp) protein (876aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Q9_GEMAT
serine/threonine protein kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
protein kinase
13_2_20cm_scaffold_1186_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3461..4618)
DNA (1158bp) protein (386aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Frankia sp. EUN1f RepID=D3D1M3_9ACTO
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:KFE72153.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;"
endonuclease/exonuclease/phosphatase
13_2_20cm_scaffold_1186_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4662..5774)
DNA (1113bp) protein (371aa)
Cytochrome-c peroxidase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRC1_HALO1
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:AHG88112.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1186_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5771..7633)
DNA (1863bp) protein (621aa)
Transcriptional activator domain n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1B2_ROSS1
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional activator domain-containing protein
13_2_20cm_scaffold_1186_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7630..10470)
DNA (2841bp) protein (947aa)
Putative Serine/threonine protein kinase PrkC regulator of stationary phase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0X8_9ACTN
protein kinase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1186_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(10572..11051)
DNA (480bp) protein (160aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue-copper protein Tax=GWC2_Gemmatimonadetes_71_10_curated
blue (type 1) copper domain protein
13_2_20cm_scaffold_1186_8
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11187..12338
DNA (1152bp) protein (384aa)
Rhodanese domain protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM47_THEM7
rhodanese
Rhodanese domain protein {ECO:0000313|EMBL:ADU50377.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="The
13_2_20cm_scaffold_1186_9
unknown

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comp(12363..12707)
DNA (345bp) protein (115aa)

This feature has no annotations

13_2_20cm_scaffold_1186_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12871..13452
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I866_CALAS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_1186_11
CG_Arma_01, Armatimonadetes, Bacteria

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13521..14984
DNA (1464bp) protein (488aa)
vault protein, inter-alpha-trypsin domain-containing protein; K07114 uncharacterized protein Tax=CG_Arma_01
Putative uncharacterized protein id=4954294 bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
13_2_20cm_scaffold_1186_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15105..15608
DNA (504bp) protein (168aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_scaffold_1186_13
unknown

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16019..16474
DNA (456bp) protein (152aa)

This feature has no annotations

13_2_20cm_scaffold_1186_14
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16487..16747)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003682EF3
blue (type 1) copper domain-containing protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
plastocyanin
13_2_20cm_scaffold_1186_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16930..18069)
DNA (1140bp) protein (380aa)
molybdopterin oxidoreductase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625782 id=5224904 bin=16ft_combo_ws3_JS1 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_1186_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18669..19145)
DNA (477bp) protein (159aa)
hypothetical membrane protein id=14626219 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical membrane protein Tax=CSP1_6_Rokubacteria
Protein of unknown function DUF3341
13_2_20cm_scaffold_1186_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19142..20485)
DNA (1344bp) protein (448aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14426358 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP rbh
hypothetical protein
13_2_20cm_scaffold_1186_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20489..21079)
DNA (591bp) protein (197aa)
putative oxidoreductase; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14429767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
molybdopterin dinucleotide-binding region
Displaying 18 items

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