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13_2_20cm_scaffold_1660

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1660_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(246..1865)
DNA (1620bp) protein (540aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cysteine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L7_GEMAT
Cysteinyl-tRNA synthetase
13_2_20cm_scaffold_1660_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1939..3012)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A2485
protein of unknown function DUF1611
Uncharacterized protein {ECO:0000313|EMBL:AHG90293.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1660_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3009..4094)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI000381B90E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function UPF0118
13_2_20cm_scaffold_1660_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4118..4882)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L5_GEMAT
hypothetical protein; K03969 phage shock protein A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_1660_5
unknown

Not on your lists

comp(4828..5193)
DNA (366bp) protein (122aa)

This feature has no annotations

13_2_20cm_scaffold_1660_6
unknown

Not on your lists

comp(5231..5503)
DNA (273bp) protein (91aa)

This feature has no annotations

13_2_20cm_scaffold_1660_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5503..5793)
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_1660_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5811..8651)
DNA (2841bp) protein (947aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L0_GEMAT rbh
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UvrABC system protein A
13_2_20cm_scaffold_1660_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8811..9761
DNA (951bp) protein (317aa)
CutA1 divalent ion tolerance protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9J2_ANADF
SPY protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
CutA1 divalent ion tolerance protein
13_2_20cm_scaffold_1660_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9758..10282
DNA (525bp) protein (175aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=8266520 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
13_2_20cm_scaffold_1660_11
unknown

Not on your lists

comp(11070..11669)
DNA (600bp) protein (200aa)

This feature has no annotations

13_2_20cm_scaffold_1660_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11747..14173
DNA (2427bp) protein (809aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K7_GEMAT
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_1660_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14174..14659)
DNA (486bp) protein (162aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1660_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14802..15707)
DNA (906bp) protein (302aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1660_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15797..16321)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_1660_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16328..16960)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K3_GEMAT
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome C biogenesis protein
13_2_20cm_scaffold_1660_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16957..18984)
DNA (2028bp) protein (676aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K2_GEMAT
ccmF; cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_2_20cm_scaffold_1660_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18985..19389)
DNA (405bp) protein (135aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K1_GEMAT
ccmE; cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CcmE/CycJ protein
13_2_20cm_scaffold_1660_19

Not on your lists

comp(19396..19869)
DNA (474bp) protein (158aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SIR4_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL56050.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
13_2_20cm_scaffold_1660_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19866..20702)
DNA (837bp) protein (279aa)
glpK; glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K0_GEMAT
13_2_20cm_scaffold_1660_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20859..21353
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF36021.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
13_2_20cm_scaffold_1660_22
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(21281..22324)
DNA (1044bp) protein (348aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
S-methyl-5-thioribose-1-phosphate isomerase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
Methylthioribose-1-phosphate isomerase id=3779777 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1660_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

22452..22832
DNA (381bp) protein (127aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T70_SOLUE
13_2_20cm_scaffold_1660_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

22829..23209
DNA (381bp) protein (127aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Enoyl-CoA hydratase-isomerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FGR3_9RHIZ
Enoyl-CoA hydratase/isomerase
13_2_20cm_scaffold_1660_25
unknown

Not on your lists

23206..23577
DNA (372bp) protein (124aa)

This feature has no annotations

13_2_20cm_scaffold_1660_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23712..24029
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF721
13_2_20cm_scaffold_1660_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24036..25988
DNA (1953bp) protein (651aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=861299 species="Bacteria; Ge
DNA gyrase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J5_GEMAT
DNA gyrase B subunit
13_2_20cm_scaffold_1660_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25985..27352)
DNA (1368bp) protein (456aa)
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:BAH37835.1}; EC=2.4.2.2 {ECO:0000313|EMBL:BAH37835.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
Pyrimidine-nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H5_GEMAT
13_2_20cm_scaffold_1660_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

27382..28185
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_1660_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28182..29537)
DNA (1356bp) protein (452aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJB6_CHLTF rbh
Displaying items 1-30 of 51 in total

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