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13_2_20cm_scaffold_2201

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2201_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..951)
DNA (951bp) protein (317aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein engA
13_2_20cm_scaffold_2201_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(948..2351)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_2201_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2397..3272)
DNA (876bp) protein (292aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_2201_4
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4472..6247
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q264_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFF58525.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
NHL repeat containing protein
13_2_20cm_scaffold_2201_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6331..7836)
DNA (1506bp) protein (502aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_2201_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7839..9029)
DNA (1191bp) protein (397aa)
UPF0272 protein Moth_2512 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Y2512_MOOTA id=5223158 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
TIGR00299 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0272 protein
13_2_20cm_scaffold_2201_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9059..9754)
DNA (696bp) protein (232aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T1_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_2_20cm_scaffold_2201_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10140..11948)
DNA (1809bp) protein (603aa)
UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRC_GEMAT
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UvrABC system protein C
13_2_20cm_scaffold_2201_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11915..13498)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S9_GEMAT rbh
hypothetical protein
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca
13_2_20cm_scaffold_2201_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13501..13776)
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_2201_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13787..15214)
DNA (1428bp) protein (476aa)
UPF0747 protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function UCP012535
13_2_20cm_scaffold_2201_12
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(15214..15765)
DNA (552bp) protein (184aa)
AMMECR1-domain protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUN8_9BACT
AMMECR1-domain protein {ECO:0000313|EMBL:EHO40537.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
13_2_20cm_scaffold_2201_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15791..16216)
DNA (426bp) protein (142aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA large subunit methyltransferase H n=1 Tax=beta proteobacterium CB RepID=M1T204_9PROT
Ribosomal RNA large subunit methyltransferase H
13_2_20cm_scaffold_2201_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16216..17529)
DNA (1314bp) protein (438aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLI2_CHLTF
Glu/Leu/Phe/Val dehydrogenase
13_2_20cm_scaffold_2201_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17536..18501)
DNA (966bp) protein (322aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
13_2_20cm_scaffold_2201_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18498..18950)
DNA (453bp) protein (151aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CZC4_HALOH
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF374
13_2_20cm_scaffold_2201_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19069..20103)
DNA (1035bp) protein (345aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=GWC2_Gemmatimonadetes_71_10_curated
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
13_2_20cm_scaffold_2201_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20114..21091)
DNA (978bp) protein (326aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT rbh
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2201_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21088..21855)
DNA (768bp) protein (256aa)
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes;
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT
13_2_20cm_scaffold_2201_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21852..22055)
DNA (204bp) protein (68aa)
lpxC/fabZ; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase (EC:3.5.1.- 4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-];
lpxC_fabZ; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase (EC:3.5.1.- 4.2.1.-)
UDP-3-O-acyl-N-acetylglucosamine deacetylase n=1 Tax=uncultured Gemmatimonadales bacterium HF0770_41L09 RepID=E7C7X0_9BACT
Displaying 20 items

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