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13_2_20cm_scaffold_535

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_535_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1047)
DNA (1047bp) protein (349aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90231.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rxy:Rxyl_0452 hypothetical protein id=18022 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
13_2_20cm_scaffold_535_2
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1044..2033)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SS87_9SYNE
hypothetical protein Tax=RBG_16_Armatimonadetes_58_9_curated
hypothetical protein
13_2_20cm_scaffold_535_3
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2030..2767)
DNA (738bp) protein (246aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L9I8_MAGSM
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
13_2_20cm_scaffold_535_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2764..3396)
DNA (633bp) protein (211aa)
O-methyltransferase, family 3 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXH6_ROSS1
O-methyltransferase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
O-methyltransferase family protein
13_2_20cm_scaffold_535_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3399..3914)
DNA (516bp) protein (172aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_535_6
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

3986..5239
DNA (1254bp) protein (418aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RBG_13_Aminicenantes_59_9_curated
Proline dipeptidase id=8266084 bin=CD_OP8_4m species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
peptidase M24
13_2_20cm_scaffold_535_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5236..6429)
DNA (1194bp) protein (398aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F2_GEMAT
13_2_20cm_scaffold_535_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6536..7843
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
DbpA RNA-binding domain protein
13_2_20cm_scaffold_535_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7913..8203)
DNA (291bp) protein (97aa)
Bacterial DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BN10_9FIRM
hup; DNA-binding protein Hup Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
histone family protein DNA-binding protein
13_2_20cm_scaffold_535_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8693..9073
DNA (381bp) protein (127aa)
tdk; thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thymidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F0_GEMAT
Thymidine kinase
13_2_20cm_scaffold_535_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9149..10150
DNA (1002bp) protein (334aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=GWC2_Gemmatimonadetes_71_10_curated
Dephospho-CoA kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E7_GEMAT
Dephospho-CoA kinase
13_2_20cm_scaffold_535_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10218..10607
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E6_GEMAT
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
gcvH; glycine cleavage system H protein
13_2_20cm_scaffold_535_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10622..13519
DNA (2898bp) protein (966aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycine dehydrogenase (decarboxylating) n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GJB5_9CYAN rbh
Glycine dehydrogenase [decarboxylating]
13_2_20cm_scaffold_535_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13545..14321
DNA (777bp) protein (259aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Gemmatimonadetes_66_8_curated
biotin/lipoate A/B protein ligase
Octanoyltransferase LipM id=3253213 bin=GWC2_Nitrospirae_57_13 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_2_20cm_scaffold_535_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14346..16022
DNA (1677bp) protein (559aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E3_GEMAT rbh
putative peptide ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, periplasmic subunit
13_2_20cm_scaffold_535_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16023..16997
DNA (975bp) protein (325aa)
Peptide ABC transporter, permease protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3APQ8_CHLCH
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, integral membrane subunit
13_2_20cm_scaffold_535_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16994..17917
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YD73_9DELT
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-type transporter, integral membrane subunit
13_2_20cm_scaffold_535_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17914..18942
DNA (1029bp) protein (343aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Halanaerobium RepID=E3DNP1_HALPG id=5224083 bin=16ft_combo_ws3_JS1 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
oligopeptide/dipeptide ABC transporter, ATPase subunit
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AHG90217.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_535_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18939..19949
DNA (1011bp) protein (337aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035ECA94
oligopeptide/dipeptide ABC transporter, ATPase subunit
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AHG90216.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_535_20
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19946..20542
DNA (597bp) protein (199aa)
hypothetical protein Tax=GWC2_Deltaproteobacteria_55_46b_curated
hypothetical protein id=15193866 bin=GWC2_NOV_55_46 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
13_2_20cm_scaffold_535_21
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20637..21911
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037885E7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW70845.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC
13_2_20cm_scaffold_535_22
unknown

Not on your lists

comp(21918..22463)
DNA (546bp) protein (182aa)

This feature has no annotations

13_2_20cm_scaffold_535_23
unknown

Not on your lists

comp(22512..22946)
DNA (435bp) protein (145aa)

This feature has no annotations

13_2_20cm_scaffold_535_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23033..24400)
DNA (1368bp) protein (456aa)
Amino acid/peptide transporter n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JC15_HYPSM
proton/peptide symporter family protein; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid/peptide transporter
13_2_20cm_scaffold_535_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24400..24795)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWF6_RUBXD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_535_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24898..25467)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D6_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_535_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25477..25962)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KI23_9GAMM
FmdB family regulatory protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
regulatory , FmdB family domain protein
13_2_20cm_scaffold_535_28
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27173..28330
DNA (1158bp) protein (386aa)
Iron complex outer membrane receptor protein; K02014 iron complex outermembrane recepter protein Tax=GWA2_Ignavibacteria_54_16_curated
Iron complex outer membrane receptor protein id=4897594 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Iron complex outer membrane receptor protein
13_2_20cm_scaffold_535_29
unknown

Not on your lists

28340..28795
DNA (456bp) protein (152aa)

This feature has no annotations

13_2_20cm_scaffold_535_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28792..29331
DNA (540bp) protein (180aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 51 in total

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