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13_2_20cm_scaffold_5659

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5659_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(67..924)
DNA (858bp) protein (286aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_scaffold_5659_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1027..1788)
DNA (762bp) protein (254aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_2_20cm_scaffold_5659_3
unknown

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comp(1820..2077)
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_scaffold_5659_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2164..3669)
DNA (1506bp) protein (502aa)
Aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_5659_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3683..4168)
DNA (486bp) protein (162aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38209.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
13_2_20cm_scaffold_5659_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4168..5514)
DNA (1347bp) protein (449aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J8_GEMAT
putative NtrC family two-component response regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative NtrC family two-component response regulator
13_2_20cm_scaffold_5659_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5511..6179)
DNA (669bp) protein (223aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_5659_8

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comp(6163..6720)
DNA (558bp) protein (186aa)
2'-5' RNA ligase n=1 Tax=uncultured prokaryote RepID=H5SIR3_9ZZZZ
2'-5' RNA ligase {ECO:0000313|EMBL:BAL56049.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
LigT; 2'-5' RNA ligase
13_2_20cm_scaffold_5659_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6717..7535)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4A1_CALAS
hypothetical protein; K06864 uncharacterized protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Conserved hypothetical protein CHP00268
13_2_20cm_scaffold_5659_10
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7694..8176
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P479_9BACT
Transcription regulator AsnC {ECO:0000313|EMBL:EIF88519.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL
leucine responsive regulatory protein
13_2_20cm_scaffold_5659_11
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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8176..9045
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036D85F8
Uncharacterized protein {ECO:0000313|EMBL:KJS17429.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
multidrug transporter
13_2_20cm_scaffold_5659_12
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9054..9575
DNA (522bp) protein (174aa)
Isochorismatase family protein {ECO:0000313|EMBL:EGL16947.1}; EC=3.-.-.- {ECO:0000313|EMBL:EGL16947.1};; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillu
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036B11A1
nicotinamidase-like amidase
13_2_20cm_scaffold_5659_13
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

9572..9874
DNA (303bp) protein (101aa)
antibiotic biosynthesis monooxygenase Tax=RBG_13_Chloroflexi_66_10_curated
antibiotic biosynthesis monooxygenase id=1245775 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
antibiotic biosynthesis monooxygenase
13_2_20cm_scaffold_5659_14
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9881..10828)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035CE211
transporter, MscS family Tax=CG_Ignavi_02
mechanosensitive ion channel protein MscS
13_2_20cm_scaffold_5659_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10840..11262
DNA (423bp) protein (141aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87628.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_5659_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11259..11963)
DNA (705bp) protein (235aa)
Agmatinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BB98_MEISD
agmatinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
agmatinase
13_2_20cm_scaffold_5659_17
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12101..12481)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F7860B
hypothetical protein
cytoplasmic protein Tax=RBG_16_Ignavibacteria_34_14_curated
13_2_20cm_scaffold_5659_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12776..13087)
DNA (312bp) protein (104aa)
putative FAD-binding protein id=14430746 bin=bin3_NC10 species=Rheinheimera perlucida genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative FAD-binding protein Tax=CSP1_5_NC10
hypothetical protein
Displaying 18 items

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