ggKbase home page

13_2_20cm_scaffold_5948

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5948_1
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1310)
DNA (1308bp) protein (436aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:00
3-isopropylmalate dehydratase large subunit n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=LEUC_SYMTH
13_2_20cm_scaffold_5948_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1319..2368)
DNA (1050bp) protein (350aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) id=14430943 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) Tax=CSP1_5_NC10
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
13_2_20cm_scaffold_5948_3
Synechococcus sp. WH 5701, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2392..2874)
DNA (483bp) protein (161aa)
Acetolactate synthase III small subunit {ECO:0000313|EMBL:EAQ76005.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EAQ76005.1};; TaxID=69042 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Sy
Acetolactate synthase III small subunit n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YV55_9SYNE
acetolactate synthase
13_2_20cm_scaffold_5948_4
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(2892..4613)
DNA (1722bp) protein (574aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798
Acetolactate synthase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDV2_THET1
acetolactate synthase large subunit
13_2_20cm_scaffold_5948_5
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(4610..6163)
DNA (1554bp) protein (518aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBS6_9BACT
13_2_20cm_scaffold_5948_6
unknown

Not on your lists

comp(6421..6573)
DNA (153bp) protein (51aa)

This feature has no annotations

13_2_20cm_scaffold_5948_7
unknown

Not on your lists

7095..7499
DNA (405bp) protein (135aa)

This feature has no annotations

13_2_20cm_scaffold_5948_8
unknown

Not on your lists

7906..8148
DNA (243bp) protein (81aa)

This feature has no annotations

13_2_20cm_scaffold_5948_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8322..9758)
DNA (1437bp) protein (479aa)
Peptidase M20 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AW5_SOLUE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_5948_10
unknown

Not on your lists

comp(9763..10218)
DNA (456bp) protein (152aa)

This feature has no annotations

13_2_20cm_scaffold_5948_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10250..10642)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Caldibacillus debilis RepID=UPI0003800F15
endoribonuclease l-psp; K07567 TdcF protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
endoribonuclease l-psp
13_2_20cm_scaffold_5948_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10642..12342)
DNA (1701bp) protein (567aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE57_GEMAT
13_2_20cm_scaffold_5948_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12339..12815)
DNA (477bp) protein (159aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
TatD-related deoxyribonuclease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7X2_AZOC5
tatD; TatD-related deoxyribonuclease
13_2_20cm_scaffold_5948_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12851..14083)
DNA (1233bp) protein (411aa)
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT
secF; protein-export membrane protein SecF
Protein translocase subunit SecF; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM
13_2_20cm_scaffold_5948_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14085..15743)
DNA (1659bp) protein (553aa)
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT rbh
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SecD export membrane protein
13_2_20cm_scaffold_5948_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15753..16265)
DNA (513bp) protein (171aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=861299 species="Bacteria; Gemmatimonad
Riboflavin kinase/FMN adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P1_GEMAT
riboflavin biosynthesis protein RibF
Displaying 16 items

View Taxonomy