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13_2_20cm_scaffold_669

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_669_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..670
DNA (669bp) protein (223aa)
hypothetical protein, partial n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00035EE4B2
ASPIC/UnbV domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ASPIC/UnbV domain protein
13_2_20cm_scaffold_669_2
unknown

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657..1814
DNA (1158bp) protein (386aa)

This feature has no annotations

13_2_20cm_scaffold_669_3
unknown

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comp(2542..2865)
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_scaffold_669_4
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3911..5185
DNA (1275bp) protein (425aa)
TonB-dependent outer membrane receptor n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T4_GRAFK
TonB-dependent outer membrane receptor
TonB-dependent outer membrane receptor {ECO:0000313|EMBL:CAL66229.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella f
13_2_20cm_scaffold_669_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5204..6685
DNA (1482bp) protein (494aa)
Membrane or secreted protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T5_GRAFK
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89360.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_669_6
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6767..7207)
DNA (441bp) protein (147aa)
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:CCZ06467.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental sa
13_2_20cm_scaffold_669_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7334..8098
DNA (765bp) protein (255aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A9_GEMAT
protein of unknown function DUF477
Uncharacterized protein {ECO:0000313|EMBL:AHG90180.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_669_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8065..8787
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_669_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8805..9368
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37771.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_669_10
unknown

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9395..9544
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_scaffold_669_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(9472..10377)
DNA (906bp) protein (302aa)
Metalloendopeptidase-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M23 id=7201700 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
yebA2; M23 peptidase domain-containing protein
13_2_20cm_scaffold_669_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(10598..12121)
DNA (1524bp) protein (508aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B6_GEMAT
13_2_20cm_scaffold_669_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12105..12980)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_669_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12985..13944)
DNA (960bp) protein (320aa)
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACCA_GEMAT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
13_2_20cm_scaffold_669_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13959..17429)
DNA (3471bp) protein (1157aa)
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B9_GEMAT rbh
DNA polymerase III, alpha subunit
13_2_20cm_scaffold_669_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17439..18014)
DNA (576bp) protein (192aa)
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AU68_RUBXD
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubr
13_2_20cm_scaffold_669_17
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18116..19471
DNA (1356bp) protein (452aa)
hypothetical protein, partial n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B72EC4
putative transporter
Putative transporter {ECO:0000313|EMBL:AGC45363.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcu
13_2_20cm_scaffold_669_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19410..21038
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZMG1_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_669_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21057..21959
DNA (903bp) protein (301aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_669_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21947..23065
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminopeptidase
13_2_20cm_scaffold_669_21
Arundo donax, Arundo, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

23436..23867
DNA (432bp) protein (144aa)
Gdh1 {ECO:0000313|EMBL:JAE21077.1}; TaxID=35708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Aru
13_2_20cm_scaffold_669_22
unknown

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23904..24143
DNA (240bp) protein (80aa)

This feature has no annotations

13_2_20cm_scaffold_669_23
unknown

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24282..24563
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 23 items

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