ggKbase home page

13_2_20cm_scaffold_888

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_888_1
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(3..698)
DNA (696bp) protein (232aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes {ECO:0000313|EMBL:CCW34802.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CCW34802.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chth
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYA2_9BACT
13_2_20cm_scaffold_888_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(717..1445)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_888_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1534..2775)
DNA (1242bp) protein (414aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_2_20cm_scaffold_888_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2772..4016)
DNA (1245bp) protein (415aa)
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
antimicrobial peptide ABC transporter permease; K02004 putative ABC transport system permease protein id=12555548 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_2_20cm_scaffold_888_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4103..5338)
DNA (1236bp) protein (412aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38186.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
13_2_20cm_scaffold_888_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5335..6579)
DNA (1245bp) protein (415aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter permease protein
13_2_20cm_scaffold_888_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6580..7806)
DNA (1227bp) protein (409aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADD8_GEMAT
MacB-like periplasmic core domain protein
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG90437.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_888_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7820..9058)
DNA (1239bp) protein (413aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter permease protein
13_2_20cm_scaffold_888_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9059..9790)
DNA (732bp) protein (244aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
13_2_20cm_scaffold_888_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9787..11061)
DNA (1275bp) protein (425aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H9_GEMAT
secretion protein HlyD family protein; K02005 HlyD family secretion protein Tax=GWC2_Gemmatimonadetes_71_10_curated
efflux transporter, RND family, MFP subunit
13_2_20cm_scaffold_888_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11081..11668)
DNA (588bp) protein (196aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I0_GEMAT
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane efflux protein
13_2_20cm_scaffold_888_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12601..13269)
DNA (669bp) protein (223aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_888_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13266..13976)
DNA (711bp) protein (237aa)
Creatininase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRU4_CLOPH
Creatininase
Creatininase {ECO:0000313|EMBL:AHG90443.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_888_14
unknown

Not on your lists

comp(13977..15593)
DNA (1617bp) protein (539aa)

This feature has no annotations

13_2_20cm_scaffold_888_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15691..17901
DNA (2211bp) protein (737aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I2_GEMAT
putative two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative two-component histidine kinase
13_2_20cm_scaffold_888_16
unknown

Not on your lists

17978..19834
DNA (1857bp) protein (619aa)

This feature has no annotations

13_2_20cm_scaffold_888_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19899..20297
DNA (399bp) protein (133aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=14628995 bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
13_2_20cm_scaffold_888_18
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

20301..21119
DNA (819bp) protein (273aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=CSP1_4_Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=14628995 bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
13_2_20cm_scaffold_888_19
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21116..21445)
DNA (330bp) protein (110aa)
tRNA-binding protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI0003471671
Molecular chaperone {ECO:0000313|EMBL:KIE07811.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
export-related chaperone CsaA
13_2_20cm_scaffold_888_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21621..22361
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39571.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_888_21
unknown

Not on your lists

22591..23277
DNA (687bp) protein (229aa)

This feature has no annotations

13_2_20cm_scaffold_888_22
unknown

Not on your lists

23285..23941
DNA (657bp) protein (219aa)

This feature has no annotations

13_2_20cm_scaffold_888_23
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23970..24764
DNA (795bp) protein (265aa)
Ankyrin repeat-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJU5_9BURK
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
13_2_20cm_scaffold_888_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24853..27096
DNA (2244bp) protein (748aa)
Serine/threonine protein kinase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ2_9BACT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG92755.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_888_25
R_NC10_66_22, NC10, Bacteria

Not on your lists

27702..29237
DNA (1536bp) protein (512aa)
Putative chaperone; K07391 magnesium chelatase family protein id=7202493 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
comM; competence ATPase ComM
Displaying 25 items

View Taxonomy