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13_2_20cm_scaffold_1601_28

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(26850..27149)

Top 3 Functional Annotations

Value Algorithm Source
type I antifreeze protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 98.0
  • Bit_score: 96
  • Evalue 1.80e-17
regulatory protein, FmdB family similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 99.0
  • Bit_score: 88
  • Evalue 9.90e-16
FmdB family regulatory protein id=24601146 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 99.0
  • Bit_score: 85
  • Evalue 3.90e-14

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGCCCACCTACGAGTACAAGTGCCCCGCGGGGCATGTGTTCGAGAAGTTCTATCCGACGATCACCGACAATCGCCGGCTGAAGTGCCCGACCTGCGGCAAGATGGCCGAGCGCCAGATCTCGGGCGGCGCGGGCCTCGTCTTCAAGGGCTCGGGCTTCTACGCCACCGACTACAAGCGCGCGGCCGATACACGGAAAGAGCCGGAGGGGGACGCGAAGGCTGCGGAGCCGAAGCCCGCTGACGCGAAGCCCGCCGACGGCGCCAAGAACAAGAAGAAAAAAGACTCCGGCGACAAGTGA
PROTEIN sequence
Length: 100
MPTYEYKCPAGHVFEKFYPTITDNRRLKCPTCGKMAERQISGGAGLVFKGSGFYATDYKRAADTRKEPEGDAKAAEPKPADAKPADGAKNKKKKDSGDK*