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13_2_20cm_scaffold_1694_19

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(21390..22595)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 404.0
  • Bit_score: 563
  • Evalue 2.00e-157
  • rbh
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 384.0
  • Bit_score: 624
  • Evalue 1.00e-175
pilC; type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 404.0
  • Bit_score: 563
  • Evalue 5.60e-158

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCGGTCTTCCAATACACCGCGCGCACGCTCAAGGGCGATCTCGTCAACGACAAGATCGACCTGCCGAGCCGCGACGACGTCATCGCCCACCTGCGCAAGAACCGCATGGTGGTGGTGCAGGTCCGGGCCGCGCCGCGCGAGTTCAAGCTCAGCTTTAAGTTCGGCGGCGGCGTCAAGACCCGCGACATCGTCGTGATGACGCGCCAGTTCGCCACCATGATCAACGCCGGGCTGCCGCTCGTCCAGGCGCTCGACATCCTGGCGCAACAGACCGAGAACAAGATCCTCGCCGACGTCACCCGTCAGGTCGTGTACGACGTCGAGAGCGGGCACACGCTCGCCGACGCGCTGCGCAAGCACCCGAAGGCGTTCAGCGACCTCTACGTCAACATGGTCGCCGCGGGCGAGGCCGGCGGTATTCTCGATACCATCCTCGTGCGGCTCGCCCAGTTCCTCGAGAAAAACGATGCCATCGTCCGCAAGGTGAAGGGCGCGATGGTCTACCCGGCCGTGATTCTGTCGGTCGCGGTGATCGCCATCTCGGTCTTGCTCATCTTCGTGATCCCCACGTTCCAGAACATGTTCGCCTCGGTGAATCTCGAGTTGCCGCTCCCGACGCGCATCGTGATCGGCCTGAGCAACCTGCTCAAGAACTACTGGTGGGCGTTCCTCGCCAGCATGGGAGCGATCGTGTTCGGCATCAACCGCTACTACCAGACGGCGCCCGGCCGCCTGCAGATCGACGGGATGCTGCTGCGGCTGCCGGTGTTGGGCGATGTGCTGCGCAAGTCAGCGGTGTCGCGGTTCACGCGCACCCTCGGCACCCTGATCTCGTCGGGCGTGTCGATCCTCGACGGCCTCGAGATCACGGCCCGTACCGCGGGCAACATGGTGATCCACAACGCCGTGATGGAGTCCCGCGCGTCCATCGCCGGGGGCGAGACCATCGCCGGGCCGCTGCAGAAATCCAAGGTGTTCCCGCCCATGGTGATCTCGATGATCGCGGTCGGCGAGCAGACGGGCGGCCTGGACGAGATGCTCTCGAAGATCGCCGACTTCTACGACGACGAGGTGGATGCCGCGGTGAGCGCGCTGCTGGCGCTGATGGAGCCCGTCATGATCGTCGTGCTGGGCGTGGTCGTCGGCGGCATGGTGATCGCCATGTACCTCCCGATCTTCGACATGGTGAACGCCGTGCAGTGA
PROTEIN sequence
Length: 402
MPVFQYTARTLKGDLVNDKIDLPSRDDVIAHLRKNRMVVVQVRAAPREFKLSFKFGGGVKTRDIVVMTRQFATMINAGLPLVQALDILAQQTENKILADVTRQVVYDVESGHTLADALRKHPKAFSDLYVNMVAAGEAGGILDTILVRLAQFLEKNDAIVRKVKGAMVYPAVILSVAVIAISVLLIFVIPTFQNMFASVNLELPLPTRIVIGLSNLLKNYWWAFLASMGAIVFGINRYYQTAPGRLQIDGMLLRLPVLGDVLRKSAVSRFTRTLGTLISSGVSILDGLEITARTAGNMVIHNAVMESRASIAGGETIAGPLQKSKVFPPMVISMIAVGEQTGGLDEMLSKIADFYDDEVDAAVSALLALMEPVMIVVLGVVVGGMVIAMYLPIFDMVNAVQ*