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13_2_20cm_scaffold_1694

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1694_1
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

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comp(1..279)
DNA (279bp) protein (93aa)
transmembrane and TPR repeat-containing protein 1-like Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
13_2_20cm_scaffold_1694_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(269..1744)
DNA (1476bp) protein (492aa)
Uncharacterized protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1694_3
unknown

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2021..2845
DNA (825bp) protein (275aa)

This feature has no annotations

13_2_20cm_scaffold_1694_4
unknown

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comp(3249..4049)
DNA (801bp) protein (267aa)

This feature has no annotations

13_2_20cm_scaffold_1694_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4718..6277)
DNA (1560bp) protein (520aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE55_CHLTF
transmembrane and TPR repeat-containing protein CG4341-like Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_1694_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6262..6972)
DNA (711bp) protein (237aa)
glycosyl transferase family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glycosyl transferase family 2 id=8265855 bin=CD_OP8_4m species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Glycosyltransferases involved in cell wall biogenesis
13_2_20cm_scaffold_1694_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6969..7535)
DNA (567bp) protein (189aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9W9_GEMAT
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:AHG91524.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1694_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8338..9897)
DNA (1560bp) protein (520aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UH26_ANASK
transmembrane and TPR repeat-containing protein CG4341-like Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_1694_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9894..11555)
DNA (1662bp) protein (554aa)
two-component histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X0_GEMAT rbh
two-component histidine kinase
13_2_20cm_scaffold_1694_10
unknown

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11605..12306
DNA (702bp) protein (234aa)

This feature has no annotations

13_2_20cm_scaffold_1694_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12303..13865)
DNA (1563bp) protein (521aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ3_GEMAT
ATP-binding region ATPase domain protein
13_2_20cm_scaffold_1694_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13879..14631)
DNA (753bp) protein (251aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ2_GEMAT
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG92379.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1694_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14949..15296)
DNA (348bp) protein (116aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91743.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1694_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15349..15795)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035E6308
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG91609.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1694_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15815..17536)
DNA (1722bp) protein (574aa)
PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FXS5_9BURK rbh
PQQ-dependent dehydrogenase, methanol/ethanol family
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:AHG91607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1694_16
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(18320..19123)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000377A152
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGE22037.1}; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
13_2_20cm_scaffold_1694_17
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(19120..20112)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003647B52
ABC-type uncharacterized transport system, ATPase component
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:AFV76265.1}; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Th
13_2_20cm_scaffold_1694_18
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20168..21322)
DNA (1155bp) protein (385aa)
Ribonucleotide reductase, beta subunit n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QF49_9FIRM
Ribonucleotide reductase, beta subunit {ECO:0000313|EMBL:EKP95566.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.
ribonucleotide reductase
13_2_20cm_scaffold_1694_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21390..22595)
DNA (1206bp) protein (402aa)
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT rbh
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated
pilC; type IV pilus assembly protein PilC
13_2_20cm_scaffold_1694_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22619..23773)
DNA (1155bp) protein (385aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA13_GEMAT rbh
pilT; twitching mobility protein; K02669 twitching motility protein PilT Tax=RBG_16_Gemmatimonadetes_66_8_curated
pilT; twitching mobility protein
13_2_20cm_scaffold_1694_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23770..23940)
DNA (171bp) protein (57aa)
type II secretion system protein E n=1 Tax=Hippea alviniae RepID=UPI0003B40D66
type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=GWC2_Gemmatimonadetes_71_10_curated
type IV-a pilus assembly atpase pilb
13_2_20cm_scaffold_1694_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23888..25411)
DNA (1524bp) protein (508aa)
Type IV pilus assembly protein PilB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA14_GEMAT
pilB; type IV pilus biogenesis protein PilB; K02652 type IV pilus assembly protein PilB Tax=RBG_16_Gemmatimonadetes_66_8_curated
type II secretion system protein E
13_2_20cm_scaffold_1694_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25457..25867)
DNA (411bp) protein (137aa)
ComEA protein n=1 Tax=Rothia dentocariosa M567 RepID=D8UPU1_9MICC
competence protein ComEA-like protein with helix-hairpin-helix repeat region; K02237 competence protein ComEA Tax=RBG_16_Gemmatimonadetes_66_8_curated
Helix-hairpin-helix DNA-binding class 1
13_2_20cm_scaffold_1694_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(25941..26033)
DNA (93bp) protein (31aa)
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 24 items

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