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13_2_20cm_scaffold_1694_22

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(23888..25411)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA14_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 482.0
  • Bit_score: 652
  • Evalue 3.10e-184
pilB; type IV pilus biogenesis protein PilB; K02652 type IV pilus assembly protein PilB Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 508.0
  • Bit_score: 785
  • Evalue 4.30e-224
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 477.0
  • Bit_score: 668
  • Evalue 1.20e-189

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1524
TTGCATACGGCCACCGCAGCTGCCGCTACCGACAAGCTGGGGGAACTTCTCCTCCGCGAAGGGCTGATCACCCTTGATCAGCTGAAGAAGGGCTTGCTGGAGCAAAAGAACACCGGGATGCGCCTGGGCTACACCCTGGTCAAGCTGGGCTTCATCGAGGAGACCGAGATCTCCAAGATGCTAGCCCGGCAGTACCGCATGCCGGCCGTCGACCTGTCCCGGTTCGAGGTCGATCCCAAGATCATCAAGCTCATGCCGCCGGACATCGCCGTGAAGCACACGGTGCTGCCTCTGAAGCGTGAGGGGAGGACGCTCACGGTCGCCATCGCGGACCCCAACAACGTCACGGCGATCGAGGACATCAAGTTCGTCACCCGCTGCGATGTGTTCCCGGTGATCGCGGGGGAGTACACCCTCCGGAACGCGATCGAGCGGTATTACCAGCAGTCGGACGCCCAGCTGCAGACGCTCCTCAAGGACATCGAGGCCGCCGAGGACCTCGAGGTGGTCGAGGAGTCGGTGGACGAGGACGTCAAGGCCCAGGACTTGGCGGACGACGCCCCGGTCGTGAAGCTGATCAACGGGTTACTAACCGACGCGGTGAAGCGGGGGGCGTCGGACATCCACATCGAGCCGTTCGAGCACGAGTTGCGGGTGCGCTATCGGGTGGACGGCGCGCTGCAGGAGGTGATGAAGCCACCGATCAAGATGCGCGCGGCGCTCTGCTCGCGCGTAAAGATCATGGCCCAGTTGAACATCGCCGAGCGGCGGGTGCCGCAGGATGGGCGCATCAAGCTGAAGATGGGGAGCAAGGTCATCGACTTCCGTGTGTCGACCCTCCCCGTGTTGTTCGGCGAAAAGATCGTGCTCCGGATTCTCGACAAGGGCAACCTGACGCTCGACCTCACCAAGTTCGGCTTCGAGCCGAAGGCCGAGCAGGACTTGATGCGCGCGATCCTCAACCCGTACGGGATGGTGCTGGTGACCGGCCCGACGGGGTCGGGAAAGACCACGACGCTGTACTCGGCGCTGTCGCGCATCAACCAGCCGGAAGTGAACATCCTGACGGCCGAGGACCCGGTCGAGTACAACCTGCTGGGCATCAACCAGGTGCTGGTCCGCAACGAAGTGGGGATGACGTTCGCGGCGGCGCTGAAGGCGTTCCTGCGTCAGGACCCGAACATCATCATGGTGGGCGAGATCCGCGACCTGGAGACCGGCTCGATCGCCATCAAGGCGTCGCTCACGGGCCACTTGGTGCTCTCGACGCTGCACACGAACGATGCACCGTCCACCGTCACGCGCATGGTGGACATGGGCATCGAGCCGTTCAACGTCGCGAGCGCGGTGAATCTGATCGTGGCGCAGCGCCTGGTGCGGCGCATCTGCAAGGACTGCAAGCAGGAGCACAAGTACACCGACGAGGAGCTCAAGGCCCTCGGCATCCCGGCCGCGGAGGCGGCACGAGGTGATGGCGATGTCGAGCGCGTTGCGGCGTATGGTGCTGAAGGGCGGCTCGACTGA
PROTEIN sequence
Length: 508
LHTATAAAATDKLGELLLREGLITLDQLKKGLLEQKNTGMRLGYTLVKLGFIEETEISKMLARQYRMPAVDLSRFEVDPKIIKLMPPDIAVKHTVLPLKREGRTLTVAIADPNNVTAIEDIKFVTRCDVFPVIAGEYTLRNAIERYYQQSDAQLQTLLKDIEAAEDLEVVEESVDEDVKAQDLADDAPVVKLINGLLTDAVKRGASDIHIEPFEHELRVRYRVDGALQEVMKPPIKMRAALCSRVKIMAQLNIAERRVPQDGRIKLKMGSKVIDFRVSTLPVLFGEKIVLRILDKGNLTLDLTKFGFEPKAEQDLMRAILNPYGMVLVTGPTGSGKTTTLYSALSRINQPEVNILTAEDPVEYNLLGINQVLVRNEVGMTFAAALKAFLRQDPNIIMVGEIRDLETGSIAIKASLTGHLVLSTLHTNDAPSTVTRMVDMGIEPFNVASAVNLIVAQRLVRRICKDCKQEHKYTDEELKALGIPAAEAARGDGDVERVAAYGAEGRLD*