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13_2_20cm_scaffold_2848_18

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: 15986..16300

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 96.0
  • Bit_score: 168
  • Evalue 2.80e-39
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 102.0
  • Bit_score: 190
  • Evalue 9.70e-46
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 102.0
  • Bit_score: 170
  • Evalue 3.60e-40

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 315
ATGACGAAGGCCGACCTAGTCGAGAAGGTCACCGCACACATCGCACGCACTGCCGGTCCCCTGATCTCCAAGAAGGACTGCGCTCGGGTCGTCGACTCCTTTCTCGATGCCGTGAAAGCGGCGCTCGCCGAGCAGCATAACATTGAGATTCGTGGGTTTGGCACGTTCAAGATTCGGCAGCGCAAGACGCGCATGGCACGAAATCCGCGCACCGGAGACCCTGTGGAAGTCGCCGCGCGGCCGGTGCCTGTCTTCAAGCCCAGCAAGGAGTTGCGGGCGATGGTGGCGGAGGCGAGCGAGCGCGTCACACCCTGA
PROTEIN sequence
Length: 105
MTKADLVEKVTAHIARTAGPLISKKDCARVVDSFLDAVKAALAEQHNIEIRGFGTFKIRQRKTRMARNPRTGDPVEVAARPVPVFKPSKELRAMVAEASERVTP*