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13_2_20cm_scaffold_2848

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2848_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3..1730
DNA (1728bp) protein (576aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_2848_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1788..2657
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A922_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_2848_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2654..3310
DNA (657bp) protein (219aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A921_GEMAT
13_2_20cm_scaffold_2848_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3320..3532
DNA (213bp) protein (71aa)
Putative RNA polymerase omega subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A920_GEMAT
rpoZ; putative RNA polymerase omega subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpoZ; putative RNA polymerase omega subunit
13_2_20cm_scaffold_2848_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3532..4725
DNA (1194bp) protein (398aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBJ9_9FIRM
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AHG90856.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS7
13_2_20cm_scaffold_2848_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4722..5507
DNA (786bp) protein (262aa)
putative DNA glycosylase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A919_GEMAT
putative DNA glycosylase
13_2_20cm_scaffold_2848_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5473..6891
DNA (1419bp) protein (473aa)
dnaB; replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A918_GEMAT rbh
13_2_20cm_scaffold_2848_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6884..8173
DNA (1290bp) protein (430aa)
DNA repair protein radA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A917_GEMAT
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
radA; DNA repair protein RadA
13_2_20cm_scaffold_2848_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8145..8855
DNA (711bp) protein (237aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A916_GEMAT
13_2_20cm_scaffold_2848_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8852..9517
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A915_GEMAT
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Sua5/YciO/YrdC/YwlC family protein
13_2_20cm_scaffold_2848_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9514..10008
DNA (495bp) protein (165aa)
protein-tyrosine-phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-tyrosine-phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A914_GEMAT
Phosphotyrosine protein phosphatase I superfamily
13_2_20cm_scaffold_2848_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9992..10810
DNA (819bp) protein (273aa)
Shikimate dehydrogenase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIU5_9CHRO
aroE; shikimate 5-dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Shikimate dehydrogenase
13_2_20cm_scaffold_2848_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10803..11552
DNA (750bp) protein (250aa)
Phosphoribosyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVJ4_RUBXD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosyltransferase
13_2_20cm_scaffold_2848_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12537..13715
DNA (1179bp) protein (393aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphoglycerate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A910_GEMAT
Phosphoglycerate kinase
13_2_20cm_scaffold_2848_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13745..14461
DNA (717bp) protein (239aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Triosephosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A909_GEMAT
Triosephosphate isomerase, bacterial/eukaryotic
13_2_20cm_scaffold_2848_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14478..14831
DNA (354bp) protein (118aa)
Protein translocase subunit secG n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2II23_ANADE
secG; protein-export membrane protein SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
preprotein translocase subunit SecG
13_2_20cm_scaffold_2848_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14848..15927
DNA (1080bp) protein (360aa)
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A907_GEMAT
13_2_20cm_scaffold_2848_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15986..16300
DNA (315bp) protein (105aa)
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
histone family protein DNA-binding protein
13_2_20cm_scaffold_2848_19
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

16408..18156
DNA (1749bp) protein (583aa)
Putative protease with the C-terminal PDZ domain n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KZT2_9SYNC
Peptidase M61 {ECO:0000313|EMBL:KIF21300.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
peptidase M61
13_2_20cm_scaffold_2848_20
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

18180..18443
DNA (264bp) protein (88aa)
MoaD family protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M5C3_9CYAN
moaD; molybdopterin converting factor, subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RBG_16_Acidobacteria_68_9_curated
thiamine S protein
13_2_20cm_scaffold_2848_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18449..18889
DNA (441bp) protein (147aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MoaD family protein id=2136376 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin biosynthesis MoaE protein
13_2_20cm_scaffold_2848_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

18882..19850
DNA (969bp) protein (323aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Molybdenum cofactor biosynthesis protein A id=2653035 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moaA; molybdenum cofactor biosynthesis protein A
13_2_20cm_scaffold_2848_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19850..20326
DNA (477bp) protein (159aa)
tRNA/rRNA methyltransferase SpoU; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative tRNA (cytidine(34)-2'-O)-methyltransferase id=2021425 bin=GWD2_Deltaproteobacteria_55_8 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TrmH family RNA methyltransferase
13_2_20cm_scaffold_2848_24
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

20360..20893
DNA (534bp) protein (178aa)
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RBG_16_Acidobacteria_68_9_curated
Malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A902_GEMAT
Malate dehydrogenase
Displaying 24 items

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