ggKbase home page

13_2_20cm_scaffold_3080_2

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: 1650..2198

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 176.0
  • Bit_score: 148
  • Evalue 6.90e-33
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 176.0
  • Bit_score: 148
  • Evalue 1.90e-33
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 174.0
  • Bit_score: 148
  • Evalue 9.60e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 549
ATGGGTGTGAGGGGAGACCCCTCCGACGCGGAGGTGGTAGCCCGGGTGCTCGGCGGTGATCGCGAGGTGTTCGGCCTCGTGATTCGTCGCTACGAGACGGGGCTCGTGCGGTTCGCCACGCGGATGCTGGGAAGCAGCGATGCCGCCGCCGATGCGGTGGCGGAGAGCTTCGTGCGGGCGTACCGCCATCTGCCGAGCTGTCGCGATCCGGCGCGGTTGCGCACGTGGCTGTATCGGATCGTCGCAAACCGGTGCAAGAGCCACTTGGCCCGACGACCGATCGCCGACGTCCCGCTCGACGACGCTCCGCCGGTGGCCGATCCGGCGGACTCCCACGGAGCGTTGGAGCGCGCCGAGCAGCTGGCGCTCGTGGAGCGGGCGCTGGCGCAGCTGTCTCCCGAGAAGCGGGAGGCATTTGTGCTGAAGCACGTGGAGGGGCTGAGCTATCAGGAGATGGCCGCCGTGACGGGCGAGCGCATCCCGACGCTCAAGATGCGCGTGCATCGCGCGCGCGAAGCACTGTTGCATGTATTGGAGGACCACGCATGA
PROTEIN sequence
Length: 183
MGVRGDPSDAEVVARVLGGDREVFGLVIRRYETGLVRFATRMLGSSDAAADAVAESFVRAYRHLPSCRDPARLRTWLYRIVANRCKSHLARRPIADVPLDDAPPVADPADSHGALERAEQLALVERALAQLSPEKREAFVLKHVEGLSYQEMAAVTGERIPTLKMRVHRAREALLHVLEDHA*