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13_2_20cm_scaffold_3080

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3080_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1..1581
DNA (1581bp) protein (527aa)
hypothetical protein; K06888 Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein; K06888 id=24560588 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
N-acylglucosamine 2-epimerase
13_2_20cm_scaffold_3080_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1650..2198
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3080_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2195..2809
DNA (615bp) protein (205aa)
putative glycosyl hydrolase, family 13 (EC:2.4.1.-)
Putative Glycosyl hydrolase, family 13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDN4_9BACT
glycoside hydrolase family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_3080_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2806..3471
DNA (666bp) protein (222aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_3080_5
unknown

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3590..3796
DNA (207bp) protein (69aa)

This feature has no annotations

13_2_20cm_scaffold_3080_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3804..5036)
DNA (1233bp) protein (411aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
13_2_20cm_scaffold_3080_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5123..6247
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA53_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_1 repeat-containing protein
13_2_20cm_scaffold_3080_8
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(6319..6705)
DNA (387bp) protein (129aa)
DoxX family protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AV40_HERA2
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ABX03118.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus
13_2_20cm_scaffold_3080_9
unknown

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comp(6702..7034)
DNA (333bp) protein (111aa)

This feature has no annotations

13_2_20cm_scaffold_3080_10
unknown

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comp(7031..8182)
DNA (1152bp) protein (384aa)

This feature has no annotations

13_2_20cm_scaffold_3080_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8311..8769)
DNA (459bp) protein (153aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHI7_CORCM
cyclic nucleotide-binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cyclic nucleotide-binding domain-containing protein
13_2_20cm_scaffold_3080_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8805..9359
DNA (555bp) protein (185aa)
pgsA2; CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
CDP-alcohol phosphatidyltransferase family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUZ5_CORCM
pgsA2; CDP-alcohol phosphatidyltransferase
13_2_20cm_scaffold_3080_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9359..9889
DNA (531bp) protein (177aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_3080_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9892..10308
DNA (417bp) protein (139aa)
OsmC family protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEP3_9CHLR
hypothetical protein; K07397 putative redox protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
yhfA; protein yhfA
13_2_20cm_scaffold_3080_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10433..10801
DNA (369bp) protein (123aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_3080_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(10812..11081)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_3080_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11290..11580
DNA (291bp) protein (97aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_3080_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11577..12230
DNA (654bp) protein (218aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative oxidoreductase
13_2_20cm_scaffold_3080_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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12421..12585
DNA (165bp) protein (55aa)
vitamin K epoxide reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_3080_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12582..13550
DNA (969bp) protein (323aa)
Probable potassium transport system protein kup n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4UAF9_OCEP5
kup; potassium uptake protein; K03549 KUP system potassium uptake protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
potassium transporter
Displaying 20 items

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