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13_2_20cm_scaffold_641_3

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(1057..1878)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSX8_PSEUU id=5223540 bin=16ft_combo_ws3_JS1 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 274.0
  • Bit_score: 393
  • Evalue 1.40e-106
  • rbh
binding-protein-dependent transporters inner membrane component; K10190 lactose/L-arabinose transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 273.0
  • Bit_score: 393
  • Evalue 2.00e-106
binding-protein-dependent transporters inner membrane component similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 270.0
  • Bit_score: 353
  • Evalue 4.60e-95

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 822
ATGACGCGCCGGCTACAACAGGTATCGCTGTACGGCGCCCTCGTGGTCGGGGCCGCGGTCACGCTGGTGCCGCTCGTGTGGATGGTGTCCGCGTCGCTCATGCCCACCGGCCAGGCGACGACGTACCCGCCCCGCTTCTTCCCGCGGGCGGTGACCTTCGAGCACTACGCCGAGCTGTTCACGCGCCTCTCCCTGGGGCGCTACGTCCTGAACAGCTCCATCGTCGCCCTGGCGGCGACCCTGCTGTCGCTGCTGTTCAATTCGATGGCGGGGTACGCGCTCGCGAAGCTCCGTTTCCGGGGGCGGGACGGCCTGTTCCGGCTGCTCGTCGCGGGGCTCGTCATTCCCGCGCAGGTGACGATGCTGCCGCTCTTCCTCCTGCTCCGCGCGATGGGGCTCGTGAACACCTACCTCGGCGCCATCGTGCCGGCGATGGCCACGATCTTCGGGATCTTCCTGATCCGCCAGTACGCGCTGTCTATCCCCGACGACCTGCTCGACGCCGCGCGGCTCGACGGTGCGGGGGAGTTCCGCATCTACTGGTCGGTCGTGGTCCCGTCGCTGCGCCCCGTGCTCGCGACGCTCGCGATCTTCACGTTCCTGTCGACGTGGAACGACTTCCTCTGGCCGCTGGTGGTGCTCTCGGACGACGCCAAGTACACGCTCCCCGTCGCGCTCGCCAACCTCGCGGGCGAGCACGTGCAGGACACCGAGCTCATGATGGCGGGCTCGGTGCTCACGGTGCTGCCGGTGTTGTTATTGTTCGTGCTGCTGCAACGCTACTACATCGAGGGCATCATGGCGGGGAGCACCAAGGGATGA
PROTEIN sequence
Length: 274
MTRRLQQVSLYGALVVGAAVTLVPLVWMVSASLMPTGQATTYPPRFFPRAVTFEHYAELFTRLSLGRYVLNSSIVALAATLLSLLFNSMAGYALAKLRFRGRDGLFRLLVAGLVIPAQVTMLPLFLLLRAMGLVNTYLGAIVPAMATIFGIFLIRQYALSIPDDLLDAARLDGAGEFRIYWSVVVPSLRPVLATLAIFTFLSTWNDFLWPLVVLSDDAKYTLPVALANLAGEHVQDTELMMAGSVLTVLPVLLLFVLLQRYYIEGIMAGSTKG*