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13_2_20cm_scaffold_641

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_641_1
unknown

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1..111
DNA (111bp) protein (37aa)

This feature has no annotations

13_2_20cm_scaffold_641_2
CSP1_5_NC10, NC10, Bacteria

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comp(83..1060)
DNA (978bp) protein (326aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] id=14430585 bin=bin3_NC10 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin3_NC10 organism_group=NC10 rbh
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=CSP1_5_NC10
6-phosphofructokinase
13_2_20cm_scaffold_641_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1057..1878)
DNA (822bp) protein (274aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSX8_PSEUU id=5223540 bin=16ft_combo_ws3_JS1 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
binding-protein-dependent transporters inner membrane component; K10190 lactose/L-arabinose transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
binding-protein-dependent transporters inner membrane component
13_2_20cm_scaffold_641_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1875..2762)
DNA (888bp) protein (296aa)
ABC-type sugar transport system permease subunit n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AIU2_IGNAJ id=5223541 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
ABC-type sugar transport system permease subunit; K10189 lactose/L-arabinose transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
binding-protein-dependent transporters inner membrane component
13_2_20cm_scaffold_641_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2759..3958)
DNA (1200bp) protein (400aa)
Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B; K10188 lactose/L-arabinose transport system substrate-binding protein id=24457719 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B; K10188 lactose/L-arabinose transport system substrate-binding protein Tax=RBG_16_RIF_WS3X_71_46_curated
carbohydrate ABC transporter substrate-binding protein, CUT1 family
13_2_20cm_scaffold_641_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4138..5553)
DNA (1416bp) protein (472aa)
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=24457720 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_2_20cm_scaffold_641_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5627..8506)
DNA (2880bp) protein (960aa)
OmpA-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QH43_9DELT rbh
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_641_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(8520..9551)
DNA (1032bp) protein (344aa)
LacI family transcriptional regulator n=2 Tax=Rhodanobacter RepID=I4WNC0_9GAMM id=5223544 bin=16ft_combo_ws3_JS1 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
transcriptional regulator Tax=RBG_16_RIF_WS3X_71_46_curated
LacI family transcriptional regulator
13_2_20cm_scaffold_641_9
unknown

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9786..10130
DNA (345bp) protein (115aa)

This feature has no annotations

13_2_20cm_scaffold_641_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10145..12397
DNA (2253bp) protein (751aa)
quinoprotein glucose dehydrogenase; K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035EF10E
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein
13_2_20cm_scaffold_641_11
unknown

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12434..12868
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying 11 items

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