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13_2_20cm_scaffold_641_8

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(8520..9551)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=2 Tax=Rhodanobacter RepID=I4WNC0_9GAMM id=5223544 bin=16ft_combo_ws3_JS1 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 343.0
  • Bit_score: 349
  • Evalue 3.80e-93
  • rbh
transcriptional regulator Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 343.0
  • Bit_score: 349
  • Evalue 5.40e-93
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 331.0
  • Bit_score: 313
  • Evalue 6.60e-83

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1032
ATGGTCACCATCAAGGACGTGGCGCGGGCGGCGCGGGTGTCCGTCGCGACCGTCTCCCGAGTTCACAACAACAGTGGGCCCGTCACCGAAGGCACGCGGCGCCGCGTGCGGGCGGTCGCCACGCGGCTCGGGTACGCCCCCCACGCCGCCGCCCGCACCCTCAGCACCAACCGCACCAGCACCGTCGGCGTGCTCCTCCCAGATCTGTACGGCGAGTTCTACTCCGAGCTGATCCGCGGCATCGATCAGACGGCGCAGCGCCACGGCTACCACCTGCTCGTCGCCAGCTCCCACGACCAGAAGCCCGCGATCGAGGCGGCGCTGCAATCGATGCGCGGCCGTGTCGACGGCCTCCTCGTCATGTCCCCCGCCCCGGGCGCCTACGGCGCCGTGCGCGACCTCCCGGCGTCGTTTCCGGTGGTGCTGCTGAACAGCGCGGCCGCGGGCCGGGCATTCGACTCGCTGGCCGTCGCCAACGCGCAGGGGGCGCGTGCCATGGTGCGCCATCTGATCGCGCTCGGCCACGCCCGAGTCGCGATGATCGCCGGCCCGGCCAAGAACTCGGACGCGGCGGGACGGCTGCGGGGCTATCGCGCCGCGCTGCAGGACGCGGGAGTCCGCGCGACGCCGGCCTGGGAGATCCCGGGCGACTTCACCGAGACCTCGGGCTTCGCCGCCTGCCTGAAGCTGCTCGCCGAGCGATCTCCGCTCCGGCCCACCGCGATCTTCGCGGCGAACGACGCCATGGCGATCGGTGCGCTGAGCGCGCTCCGCGAAGCGCACGTGCAGGTGCCGGGGGACATGGCCGTCGCGGGGTTCGACGACATCCCCATGGCGCGCTACATGCACCCCCCGCTGTCCACGGTGCGCGTGAACATCAGCGCGCTGGGCGAGCGCGCCACGCGCCGGCTGCTCGACGCGGTGGCGAACGGGCGGCAGCACCAGAAGCGACGGGAGACGCTTCCCGTGACACTCGTGATTCGGGAATCCTGTGGCGGGCGCGGCCAGCCCGCGACTGCTTCACCACCCTAA
PROTEIN sequence
Length: 344
MVTIKDVARAARVSVATVSRVHNNSGPVTEGTRRRVRAVATRLGYAPHAAARTLSTNRTSTVGVLLPDLYGEFYSELIRGIDQTAQRHGYHLLVASSHDQKPAIEAALQSMRGRVDGLLVMSPAPGAYGAVRDLPASFPVVLLNSAAAGRAFDSLAVANAQGARAMVRHLIALGHARVAMIAGPAKNSDAAGRLRGYRAALQDAGVRATPAWEIPGDFTETSGFAACLKLLAERSPLRPTAIFAANDAMAIGALSALREAHVQVPGDMAVAGFDDIPMARYMHPPLSTVRVNISALGERATRRLLDAVANGRQHQKRRETLPVTLVIRESCGGRGQPATASPP*