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13_2_20cm_scaffold_641_5

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(2759..3958)

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B; K10188 lactose/L-arabinose transport system substrate-binding protein id=24457719 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 397.0
  • Bit_score: 560
  • Evalue 1.70e-156
  • rbh
Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B; K10188 lactose/L-arabinose transport system substrate-binding protein Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 398.0
  • Bit_score: 560
  • Evalue 2.30e-156
carbohydrate ABC transporter substrate-binding protein, CUT1 family similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 399.0
  • Bit_score: 445
  • Evalue 2.20e-122

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1200
GTGACGCTCGACTTCTGGGGGCTCGGGCGGGAAGGCGAGGTGGTGGCGGAGCTGATGCCGGCGTTCGAGCGCGAGAACCCGGGCATCCGCGTGCGGGTGCAGCAGATTCCCTGGACCGCGGCGCACGAGAAGCTGCTCACCGCGTACGTCGGCAACGCCACGCCCGACGTGGCCCAGCTCGGCAACACGTGGGTCCCGGAATTCGTCGCGCTGGACGGGCTCGTCCGGCTCGACTCCCTCGTCGCGGCGTCCGCGACCGTCCATCCGGCCGACTATTTCTCGGGGATCTGGAGCACCAACGTGCTGGACGGCGGCGTGTACGGCGTGCCGTGGTACGTGGACACCCGTCTGCTGTTCTACCGCAAGGACCTGCTCGCGCGCGCCGGATTCCCGAATCCGCCGACGTCGTGGCGCGAGTGGCTCGCCGCCATGCGGGCGATGAAGGCGCAGGGTGGTCCCGACCGCTACCCGATCTTCATCCCGACGAACGAGTGGCCCCCGCCCACCATCCTCGGGCTCCAGGCCGGCTCGCCGATCCTGCGTGACGGCGCCCGCTACGGCGCCTTCACCGAGCCCCCGTTCCGCCGCGCGTTCGACTTCTACCTGAGCCTGTACCGCATGGGGCTCGCACCACGGCTCGGGATCAACGAGATCGGGAACATCTATCAGGAGTTCGCTCGCGGGACGGTCGCCATGTGGATCACCGGCCCGTGGAACGTCGGCGAGTTTCGCCGCCGCCTGCCGGCCGACTTCCAGGACAAATGGGGGACCGCGCCGATGCCCGGCCCGGACGGCGCGGCGTCGGGCATCTCGCTCGCCGGCGGCTCGAGCCTGGTGGTGTTCCGCGCGTCGCGCCACCAGGCCGCGGCGTGGAAGCTGGTCGAGTTCCTGTCGCGCCCGGAGCAGCAACTGCGCGTCTACCGGCTGTCGGGCGACCTGCCGGCGCGCCTCGAGGCGTGGCGCGACCCGGCGCTCGCGGCGGACCAGGCCACGCGGGCGTTCTGGGAGCAGCTGCAGCGCGTCGTGCCGACGCCCCAGGTCCCGGAGTGGGAGCTGATCGCGACCCGCATCTTCGACTACGGCGAGCAGGCGATCCGGGGCGGCGCGCCCGCCGACACGGTGCTGTCCCGCCTCGACGCCGAGGTGAACCGCATCCTCGAGCGACGCCGCTGGCTGCTGGCGCGGCGCGGCCGGCCGTGA
PROTEIN sequence
Length: 400
VTLDFWGLGREGEVVAELMPAFERENPGIRVRVQQIPWTAAHEKLLTAYVGNATPDVAQLGNTWVPEFVALDGLVRLDSLVAASATVHPADYFSGIWSTNVLDGGVYGVPWYVDTRLLFYRKDLLARAGFPNPPTSWREWLAAMRAMKAQGGPDRYPIFIPTNEWPPPTILGLQAGSPILRDGARYGAFTEPPFRRAFDFYLSLYRMGLAPRLGINEIGNIYQEFARGTVAMWITGPWNVGEFRRRLPADFQDKWGTAPMPGPDGAASGISLAGGSSLVVFRASRHQAAAWKLVEFLSRPEQQLRVYRLSGDLPARLEAWRDPALAADQATRAFWEQLQRVVPTPQVPEWELIATRIFDYGEQAIRGGAPADTVLSRLDAEVNRILERRRWLLARRGRP*