ggKbase home page

13_2_20cm_scaffold_1257

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1257_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..591)
DNA (591bp) protein (197aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR3_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_2_20cm_scaffold_1257_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(610..2217)
DNA (1608bp) protein (536aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR3_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_2_20cm_scaffold_1257_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2281..2883
DNA (603bp) protein (201aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEA2_9BACT
peptide methionine sulfoxide reductase
13_2_20cm_scaffold_1257_4
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2902..3414
DNA (513bp) protein (171aa)
Putative oxidoreductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=GWF2_Verrucomicrobia_62_7_curated
Methionine-R-sulfoxide reductase n=1 Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6HF61_9LEPT
oxidoreductase
13_2_20cm_scaffold_1257_5
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3515..4018
DNA (504bp) protein (168aa)
NIPSNAP family containing protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TBX9_BURPP
NIPSNAP family containing protein
NIPSNAP family containing protein {ECO:0000313|EMBL:ACD19777.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhold
13_2_20cm_scaffold_1257_6
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4015..4620
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KEI3_9BACT
Alpha/beta hydrolase {ECO:0000313|EMBL:KHA80655.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium
hypothetical protein
13_2_20cm_scaffold_1257_7
unknown

Not on your lists

4820..5044
DNA (225bp) protein (75aa)

This feature has no annotations

13_2_20cm_scaffold_1257_8
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5115..5561
DNA (447bp) protein (149aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Methylosarcina fibrata RepID=UPI000379B215
phnB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD84882.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
13_2_20cm_scaffold_1257_9
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5765..6079
DNA (315bp) protein (105aa)
Activator of Hsp90 ATPase 1 family protein id=4697419 bin=GWC2_Pelobacter_58_13 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWC2_Pelobacteraceae_58_13_curated
hypothetical protein
13_2_20cm_scaffold_1257_10
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6212..7222
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037214E7
WD40-like Beta Propeller Repeat {ECO:0000313|EMBL:GAO02153.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacter
Xaa-Pro aminopeptidase-like protein
13_2_20cm_scaffold_1257_11
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7375..7662
DNA (288bp) protein (96aa)
Putative acetyltransferase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6RZH0_9FLAO
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGO93120.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri
putative acetyltransferase
13_2_20cm_scaffold_1257_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7837..8325
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZM97_OPITP
Uncharacterized protein {ECO:0000313|EMBL:GAN45159.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
13_2_20cm_scaffold_1257_13
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8506..9561
DNA (1056bp) protein (352aa)
AraC family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7G3_MYXSD
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AGC43502.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
13_2_20cm_scaffold_1257_14
unknown

Not on your lists

comp(9807..10136)
DNA (330bp) protein (110aa)

This feature has no annotations

13_2_20cm_scaffold_1257_15
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10115..11881)
DNA (1767bp) protein (589aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C0X9_9XANT
TonB-dependent receptor
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EGD20822.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xantho
Displaying 15 items

View Taxonomy